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Homo sapiens (human) colon cancer associated transcript 1 (CCAT1) URS000075ADFF_9606

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CCAT1: CCAT1, a long non-coding RNA (lncRNA), has been found to play a role in the development of neuropathic pain [PMC5685722]. Overexpression of CCAT1 has been shown to alleviate pain thresholds, partly through the regulation of SGK3 and miR-155/SGK3 expression [PMC5685722]. Several other lncRNAs, including KCNA2-AS, uc.48+, NON-RATT021972, MRAK009713, BC168687, XIST, CCAT1, and NEAT1 have also been associated with neuropathic pain [PMC9289270]. However, the specific functions of most lncRNAs in pain research remain unknown [PMC7092675]. Mechanistically, lncRNAs can regulate the expression of pain-related molecules by binding to mRNA or sponging microRNAs [PMC6430490]. CCAT1 has been shown to play crucial roles in the development of neuropathic pain and can improve pain thresholds and cold allodynia in animal models [PMC5685722]. Additionally, CCAT1 has been implicated in bladder cancer development through its interaction with TP63 and SOX2 proteins [PMC6127298]. It has also been found to be upregulated in hepatocellular carcinoma (HCC) and may regulate HCC cell functions via EGFR signaling pathway [PMC8109057]. Furthermore, high levels of CCAT1 expression have been associated with aggressive tumor characteristics in bladder cancer patients [PMC6786104]. In tuberculosis (TB), CCAT1 is overexpressed and may participate by regulating IL-10 expression [PMC8767507]. In summary, CCAT1 is involved in various diseases including neuropathic pain, bladder cancer, HCC and TB.

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Gene Ontology annotations

Sequence

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UUUAAAUCAUACCAAUUGAACCGAGCCUUGUAGAAACACUAUCACCUACGCAUACCUCUGCUUCUUUUCAUUAACCUGCUAUCCUCUUUACAAAUGGGAUUCUUCACCCACUCCCUUCUUCUAGAUUAGCAAUGCCCUGUUAAGUAAACGAACACGAAAUUCAAAGGGAAACAGGAGCAAUCAUCAUUACCAGCUGCCGUGUUAAGCAUUGCGAAAACGCUCACGAUUCACAGAAAAAUCCAUGCUGUUCUUUGAAGGCAUUCAAGCCUUAAUAGCUAGCUGGAUGAAUGUUUAACUUCUAGGCCAGGCACUACUCUGUCCCAACAAUAAGCCCUGUACAUUGGGAAAGGUGCCGAGACAUGAACUUUGGUCUUCUCUGCAAUCCAUCUGGAGCAUUCACUGACAACAUCGACUUUGAAGUUGCACUGACCUGGCCAGCCCUGCCACUUACCAGGUUGGCUCUGUAUGGCUAAGCGUUUUCUCCUAAAAUCCCUUGAAAACUGUGAGAAGACCAUAAGAAGAUCAUAUCUUUAAUUCUAUUUCACAAGUCACACAAUAUUCCAAUCAAAUACAGAUGGUUGAGAAAAGUCAUCCAUCUUCCCUCCCCACCCUCCCACAGCCCCUCAACCACUGCCCUGAAACUUAUAUGCUGUUAUCCGCAGCUCCAUCUGGAGCAUCACAGCUACUGUCAACCCUGACGCUCUUUCUGAAAAAACACCGGAUGGACAUCAGAACUAUUUCUUUAAGGAUGUUACUGAGCCACACAGGAAAACUUGCCUUAUGAUUUUGAAUGCACGGAUCUGAUUUGACUAAACAUGAUAACUAGAGAAUCACCCAAUCUACUCCCAUUUUCAACUCUAAAUCAUCAGAGUGUCUCAAAUCCAAAGCACACACAGACCAGCCUGGCCAACACGGUGAAACUCCACCCCUACUAAAAGUAUAAAAAUUAUCCAGGUGUGGUGGCGGGCGCCUGUAAUCCAAGCUACUUGGGAGUCUGGAGGCAGGAGAAUCCCUUGAACCUGGGAGAUGGAGGUUGCAGUGAGCAGAGAUCACACCACCGCACUCUAGCCUGGGCCACAAAUCAACAACAACAACAACAACAAAAAACAAAGCGCACACAGAGACUGAGGUCCUCUUUGGCAUUGAGAAGAUGGCUAUGCAAGUCCCAACUAGCAAGUGCAAACUUCCCAGCUUCACUUCUGCCAGUGUCCCUUCACCCCUUCUCAACCCCACUGGGAGGCAGGAGGGUGCUUGACAAUAACAGCCUUGGCAUCACUCUGCCAGGGUGUAAUAGGAACUGUUACAAUUCUGAGAUUCUGUGUAAGCACUGGCCUUUCUGCCUAGAAUGCCUUCUCCUCUCUUUUUUAACUGCAUGCUCCUAUUUAUCUUUCAAAGCCCGGAAAAAAUAACACUGCACACGGGAAAUGCUCCCUUCCUACUGCAGUCAUUUAGAUGACUCUAUGCCAUUCCAUUCAUUUCUCUUUCCUACCACAGAAGUGCUUUGAGAUUUUGGAGUCAGACUGCUUGAACUUGAAUCCUGGCCCUCUCAUCAGAGACUUGACUUAUUUUAGGCAAGUUAUAUAACCAAUUUUACCUCAGUUCCUUACCCAUAAAAUGGGUCUAAUGAGAGUACCUACCACACAGAAUUUUGAUGAAAACUGAAUGAGAUGAAGGCCUUUAAGGCAGUGGUCCCCAACCCUGGGGACACAGACAGGUACCAUUUUGUGGCCUGUUAGGAACUGGGCCACACAGCAGGAGGUGAGCAGUGGGUGAGUGAGAUCAGCGUUAUUUACAGCUGCUCCCCAUUGCUCACCUUACUGCCUGAGCUCCACCUCCUGUCAGAUCAGCAGUGGCAUUAAAUUCUCAUAGCAGCACAAACCCUGUCAUGAACUGCACAUGCGAGGGAUCUAGGUUGUGCGCUCCUUAUGAGAAUCUAAUGCCUAAUGACCUGUCACCGUCUCCCAUCACCCCUAGAUGGGAGUGUCUAGUUGCAGGAAACAAGCUCAGGGCUUCCACUGAUUCUACAUUAUGGUGAGUUGUAUAAUUAUUUCAUUAUAUAAUACAAUGUAAUAAUAAUAGAAACACAGUGCACAACAAAUGUAAUGUGCUUGAAUCAUCCCCAAACCAUCCCAGUCCACGGUCUUCCACAUUUUGUCUUUUCACAAAAUUGUCUUCCACAAAACUGGUCCCUGGUGCCAAAAAGGCUUGGGACCACUGCUUUAAAGCCUUUGCAUAGUGCUUAGAAUUGAGGGGGAAAAAAAAAACAAAAACAAUGUAGCUAGUUGCUACAAUCACUAUAUUGGUGAGUUUCAAAAGGAAAAGAAUUCUGUCCCAUUUAUGCUUGAGCCUUGAGUUGCUAACCAAGCCUGACACAAAAUUACUGUUGAAGGGAUGUGUGAGUCCUAAUUGAAAUGAGGCCUCUUAAGGGAAUUGUGGACCAAACCCCAAGCAGGCAGAAAGCCGUAUCUUAAUUAUUGCAAGUAUUUCAGGCAAGGUGUGGAUGGCCAUUUGAAUUCAAGCAGACUAGGACCUGGGAUGAGAAAGAAGGUGUGUACGUGACUUGAUCUUUGAACUUUAGCUCACCAUCUGGAAGAAGGCUGAGUAUUCUCUGCACUCACAUAGUAGCUAAUGCCUACUCCCCAGCCACCCACAAUUCUUUCUGUAGGAAGGCUCGCUAGAAUACUUUGUGAUAUUGGAUAUUAGUUCCAUAUUCUACUGUGUAUCUUAGUUCAACCAAAUUGUAAUCAUCUGAUAUUUAUUUCUUUUAAUAUAAAUAUAAGUAUAUUAAGUCUUGG

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