Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Gallus gallus (chicken) gga-miR-199-5p URS0000554A4F_9031

Automated summary: This piRNA sequence is 23 nucleotides long and is found in Gallus gallus. Annotated by 4 databases (PirBase, miRBase, ENA, RefSeq). Gallus gallus (chicken) gga-miR-199-5p sequence is a product of miR-199, gga-miR-199-5p, gga-miR-199, MIR199B1, MIR199A2, miR-199-5p genes. Found in the Gallus gallus reference genome.

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    Search for similar sequences
    CCCAGUGUUCAGACUACCUGUUC

    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    This sequence is found in 35 other species

    1. Alligator mississippiensis Ami-Mir-199-P2-v1_5p* (star (passenger))
    2. Anolis carolinensis Aca-Mir-199-P2-v1_5p* (star (passenger))
    3. Bos taurus (cattle) Bta-Mir-199-P2-v1_5p* (star (passenger))
    4. Canis lupus familiaris (dog) Cfa-Mir-199-P2-v1_5p* (star (passenger))
    5. Capra hircus (goat) chi-miR-199a-5p
    6. Cavia porcellus cpo-miR-199-5p
    7. Cervus elaphus cel-miR-199a-5p
    8. Chrysemys picta bellii Cpi-Mir-199-P2-v1_5p* (star (passenger))
    9. Columba livia (rock pigeon) cli-miR-199-5p
    10. Cricetulus griseus (Chinese hamster) cgr-miR-199a
    11. Cyprinus carpio ccr-miR-199-5p
    12. Danio rerio (zebrafish) dre-miR-199-5p
    13. Dasypus novemcinctus dno-miR-199-5p
    14. Echinops telfairi Ete-Mir-199-P2-v1_5p* (star (passenger))
    15. Eptatretus burgeri Ebu-Mir-199-P6_5p (mature (guide))
    16. Equus caballus (horse) eca-miR-199a-5p
    17. Gorilla gorilla ggo-miR-199a
    18. Hippoglossus hippoglossus (Atlantic halibut) hhi-miR-199a
    19. Homo sapiens hsa-miR-199a-5p
    20. Ictalurus punctatus ipu-miR-199a-5p
    21. Lagothrix lagotricha lla-miR-199a
    22. Lepisosteus oculatus Loc-Mir-199-P2-v1_5p (mature (co-guide))
    23. Macaca mulatta mml-miR-199a-5p
    24. Macaca nemestrina mne-miR-199a
    25. Monodelphis domestica (gray short-tailed opossum) Mdo-Mir-199-P3-v1_5p* (star (passenger))
    26. Mus musculus (house mouse) mmu-miR-199a-5p
    27. Ophiophagus hannah oha-miR-199c-5p
    28. Ornithorhynchus anatinus Oan-Mir-199-P3-v1_5p* (star (passenger))
    29. Oryctolagus cuniculus ocu-miR-199a-5p
    30. Ovis aries miscellaneous RNA
    31. Pan paniscus (pygmy chimpanzee) ppa-miR-199a
    32. Pan troglodytes ptr-miR-199a-5p
    33. Petromyzon marinus pma-miR-199a-5p
    34. Pongo pygmaeus (Bornean orangutan) ppy-miR-199a
    35. Rattus norvegicus rno-miR-199a-5p
    36. Saguinus labiatus (red-chested mustached tamarin) sla-miR-199a
    37. Salmo salar (Atlantic salmon) ssa-miR-199a-5p
    38. Sarcophilus harrisii (Tasmanian devil) Sha-Mir-199-P3-v1_5p* (star (passenger))
    39. Scyliorhinus torazame (cloudy catshark) Sto-Mir-199-P3-v1_5p* (star (passenger))
    40. Sus scrofa (pig) ssc-miR-199a-5p
    41. Taeniopygia guttata (zebra finch) Tgu-Mir-199-P3-v1_5p* (star (passenger))
    42. Takifugu rubripes (torafugu) fru-miR-199
    43. Tetraodon nigroviridis (spotted green pufferfish) tni-miR-199
    44. Tor tambroides miR-199-5p
    45. Tursiops truncatus miR-199a
    46. Xenopus tropicalis (tropical clawed frog) xtr-miR-199a-5p
    Publications