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Mus musculus (house mouse) mmu-miR-199a-5p URS0000554A4F_10090

Automated summary: This miRNA sequence is 23 nucleotides long and is found in Mus musculus. Annotated by 8 databases (PirBase, LncBase, miRBase, TarBase, MirGeneDB, ENA, RefSeq, PSICQUIC). Described in 57 papers. Mus musculus (house mouse) mmu-miR-199a-5p sequence is a product of miR-199a-5p, miR-199a, mmu-miR-199a-5p, miR-199, Mir199a-1, Mir199a-2, mmu-miR-199a genes. Interacts with lncRNAs, such as (). Interacts with protein-coding genes, including 1110005N04Rik, 1110014L17Rik, 1110034O07Rik, 1110034O24Rik, 2610030F17Rik, 5730420M11Rik, Abl2, Abll, Arg, B530004O11Rik.

Interactions 5

According to PSICQUIC, Mus musculus (house mouse) mmu-miR-199a-5p interacts with:

Interaction id Participant Synonyms
URS0000554A4F_10090-0 O70343 O70343
URS0000554A4F_10090-1 Q61221 Q61221
URS0000554A4F_10090-2 Q9WV60 Q9WV60
URS0000554A4F_10090-3 Q9WV60 Q9WV60
URS0000554A4F_10090-4 Q9WV60 Q9WV60

Genome locations

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    Gene Ontology annotations


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    Taxonomic tree

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    This sequence is found in 105 other species

    1. Alligator mississippiensis Ami-Mir-199-P2-v1_5p* (star (passenger))
    2. Anolis carolinensis Aca-Mir-199-P2-v1_5p* (star (passenger))
    3. Bos taurus (cattle) Bta-Mir-199-P2-v1_5p* (star (passenger))
    4. Canis lupus familiaris (dog) Cfa-Mir-199-P2-v1_5p* (star (passenger))
    5. Capra hircus chi-miR-199a-5p
    6. Cavia porcellus cpo-miR-199-5p
    7. Cervus elaphus (red deer) cel-miR-199a-5p
    8. Chrysemys picta bellii Cpi-Mir-199-P2-v1_5p* (star (passenger))
    9. Columba livia cli-miR-199-5p
    10. Cricetulus griseus (Chinese hamster) cgr-miR-199a
    11. Cyprinus carpio (common carp) ccr-miR-199-5p
    12. Danio rerio dre-miR-199-5p
    13. Dasypus novemcinctus (nine-banded armadillo) dno-miR-199-5p
    14. Echinops telfairi Ete-Mir-199-P2-v1_5p* (star (passenger))
    15. Equus caballus eca-miR-199a-5p
    16. Gallus gallus (chicken) gga-miR-199-5p
    17. Gorilla gorilla (western gorilla) ggo-miR-199a
    18. Hippoglossus hippoglossus (Atlantic halibut) hhi-miR-199a
    19. Homo sapiens (human) hsa-miR-199a-5p
    20. Ictalurus punctatus ipu-miR-199a-5p
    21. Lagothrix lagotricha (brown woolly monkey) lla-miR-199a
    22. Macaca mulatta mml-miR-199a-5p
    23. Macaca nemestrina mne-miR-199a
    24. Monodelphis domestica (gray short-tailed opossum) Mdo-Mir-199-P3-v1_5p* (star (passenger))
    25. Ophiophagus hannah oha-miR-199c-5p
    26. Ornithorhynchus anatinus Oan-Mir-199-P3-v1_5p* (star (passenger))
    27. Oryctolagus cuniculus ocu-miR-199a-5p
    28. Ovis aries (sheep) miscellaneous RNA
    29. Pan paniscus ppa-miR-199a
    30. Pan troglodytes (chimpanzee) ptr-miR-199a-5p
    31. Petromyzon marinus (sea lamprey) pma-miR-199a-5p
    32. Pongo pygmaeus ppy-miR-199a
    33. Rattus norvegicus rno-miR-199a-5p
    34. Saguinus labiatus sla-miR-199a
    35. Salmo salar ssa-miR-199a-5p
    36. Sarcophilus harrisii (Tasmanian devil) Sha-Mir-199-P3-v1_5p* (star (passenger))
    37. Scyliorhinus torazame (cloudy catshark) Sto-Mir-199-P3-v1_5p* (star (passenger))
    38. Sus scrofa ssc-miR-199a-5p
    39. Taeniopygia guttata (zebra finch) Tgu-Mir-199-P3-v1_5p* (star (passenger))
    40. Takifugu rubripes fru-miR-199
    41. Tetraodon nigroviridis tni-miR-199
    42. Tor tambroides miR-199-5p
    43. Tursiops truncatus miR-199a
    44. Xenopus tropicalis xtr-miR-199a-5p