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Saccharomyces cerevisiae S288C Small Nucleolar RNA secondary structure diagram

Saccharomyces cerevisiae S288C Small Nucleolar RNA URS00004E8887_559292

Automated summary: This snoRNA sequence is 109 nucleotides long and is found in Saccharomyces cerevisiae S288C. Annotated by 4 databases (SGD, RefSeq, IntAct, ENA). Described in 31 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (snR76, RF01209). Saccharomyces cerevisiae S288C Small Nucleolar RNA sequence is a product of SNR76 gene. Found in the Saccharomyces cerevisiae S288C reference genome.

Interactions 3

According to IntAct, Saccharomyces cerevisiae S288C Small Nucleolar RNA interacts with:

Interaction id Participant Synonyms
EBI-11794799 URS000061F377_559292 EBI-10903441 URS000061F377_559292 rrna 25s yeast
EBI-16764033 P38996 D6W3H8 EBI-11776 HMD1 NAB3 P38996 Q07034 YPL190C nab3_yeast
EBI-16640627 P53617 D6W0U2 EBI-12228 N0868 NRD1 P53617 YNL251C nrd1_yeast

Genome locations

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This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
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    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AAUGGAAAUGAGGAUCCACAGCACUGGGCACUGAGGGGGAAACAAAUAUCCUUUCAAAUGAGUGACAAUGCUUUAGCGGGCCUAGAAAACCCGCGCAACUGAUCCAUUG

    Taxonomic tree

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    This sequence is found in 99 other species

    1. Saccharomyces cerevisiae small nucleolar RNA snR76
    2. Saccharomyces cerevisiae EC1118 SNR76
    3. Saccharomyces cerevisiae Kyokai no. 7 K7_snR76
    4. Saccharomyces cerevisiae P301 SNR76
    5. Saccharomyces cerevisiae PE-2 SNR76
    6. Saccharomyces cerevisiae R008 SNR76
    7. Saccharomyces cerevisiae R103 SNR76
    8. Saccharomyces cerevisiae YJM1078 SNR76
    9. Saccharomyces cerevisiae YJM1083 SNR76
    10. Saccharomyces cerevisiae YJM1129 SNR76
    11. Saccharomyces cerevisiae YJM1133 SNR76
    12. Saccharomyces cerevisiae YJM1190 SNR76
    13. Saccharomyces cerevisiae YJM1199 SNR76
    14. Saccharomyces cerevisiae YJM1202 SNR76
    15. Saccharomyces cerevisiae YJM1208 SNR76
    16. Saccharomyces cerevisiae YJM1242 SNR76
    17. Saccharomyces cerevisiae YJM1244 SNR76
    18. Saccharomyces cerevisiae YJM1248 SNR76
    19. Saccharomyces cerevisiae YJM1250 SNR76
    20. Saccharomyces cerevisiae YJM1252 SNR76
    21. Saccharomyces cerevisiae YJM1273 SNR76
    22. Saccharomyces cerevisiae YJM1304 SNR76
    23. Saccharomyces cerevisiae YJM1307 SNR76
    24. Saccharomyces cerevisiae YJM1311 SNR76
    25. Saccharomyces cerevisiae YJM1326 SNR76
    26. Saccharomyces cerevisiae YJM1332 SNR76
    27. Saccharomyces cerevisiae YJM1336 SNR76
    28. Saccharomyces cerevisiae YJM1338 SNR76
    29. Saccharomyces cerevisiae YJM1342 SNR76
    30. Saccharomyces cerevisiae YJM1355 SNR76
    31. Saccharomyces cerevisiae YJM1356 SNR76
    32. Saccharomyces cerevisiae YJM1381 SNR76
    33. Saccharomyces cerevisiae YJM1383 SNR76
    34. Saccharomyces cerevisiae YJM1385 SNR76
    35. Saccharomyces cerevisiae YJM1386 SNR76
    36. Saccharomyces cerevisiae YJM1387 SNR76
    37. Saccharomyces cerevisiae YJM1388 SNR76
    38. Saccharomyces cerevisiae YJM1389 SNR76
    39. Saccharomyces cerevisiae YJM1399 SNR76
    40. Saccharomyces cerevisiae YJM1400 SNR76
    41. Saccharomyces cerevisiae YJM1401 SNR76
    42. Saccharomyces cerevisiae YJM1402 SNR76
    43. Saccharomyces cerevisiae YJM1415 SNR76
    44. Saccharomyces cerevisiae YJM1417 SNR76
    45. Saccharomyces cerevisiae YJM1418 SNR76
    46. Saccharomyces cerevisiae YJM1419 SNR76
    47. Saccharomyces cerevisiae YJM1433 SNR76
    48. Saccharomyces cerevisiae YJM1434 SNR76
    49. Saccharomyces cerevisiae YJM1439 SNR76
    50. Saccharomyces cerevisiae YJM1443 SNR76
    51. Saccharomyces cerevisiae YJM1444 SNR76
    52. Saccharomyces cerevisiae YJM1447 SNR76
    53. Saccharomyces cerevisiae YJM1450 SNR76
    54. Saccharomyces cerevisiae YJM1460 SNR76
    55. Saccharomyces cerevisiae YJM1463 SNR76
    56. Saccharomyces cerevisiae YJM1477 SNR76
    57. Saccharomyces cerevisiae YJM1478 SNR76
    58. Saccharomyces cerevisiae YJM1479 SNR76
    59. Saccharomyces cerevisiae YJM1526 SNR76
    60. Saccharomyces cerevisiae YJM1527 SNR76
    61. Saccharomyces cerevisiae YJM1549 SNR76
    62. Saccharomyces cerevisiae YJM1573 SNR76
    63. Saccharomyces cerevisiae YJM1574 SNR76
    64. Saccharomyces cerevisiae YJM1592 SNR76
    65. Saccharomyces cerevisiae YJM1615 SNR76
    66. Saccharomyces cerevisiae YJM189 SNR76
    67. Saccharomyces cerevisiae YJM193 SNR76
    68. Saccharomyces cerevisiae YJM195 SNR76
    69. Saccharomyces cerevisiae YJM244 SNR76
    70. Saccharomyces cerevisiae YJM248 SNR76
    71. Saccharomyces cerevisiae YJM270 SNR76
    72. Saccharomyces cerevisiae YJM271 SNR76
    73. Saccharomyces cerevisiae YJM320 SNR76
    74. Saccharomyces cerevisiae YJM326 SNR76
    75. Saccharomyces cerevisiae YJM428 SNR76
    76. Saccharomyces cerevisiae YJM450 SNR76
    77. Saccharomyces cerevisiae YJM451 SNR76
    78. Saccharomyces cerevisiae YJM453 SNR76
    79. Saccharomyces cerevisiae YJM456 SNR76
    80. Saccharomyces cerevisiae YJM470 SNR76
    81. Saccharomyces cerevisiae YJM541 SNR76
    82. Saccharomyces cerevisiae YJM554 SNR76
    83. Saccharomyces cerevisiae YJM555 SNR76
    84. Saccharomyces cerevisiae YJM627 SNR76
    85. Saccharomyces cerevisiae YJM681 SNR76
    86. Saccharomyces cerevisiae YJM682 SNR76
    87. Saccharomyces cerevisiae YJM683 SNR76
    88. Saccharomyces cerevisiae YJM689 SNR76
    89. Saccharomyces cerevisiae YJM693 SNR76
    90. Saccharomyces cerevisiae YJM969 SNR76
    91. Saccharomyces cerevisiae YJM972 SNR76
    92. Saccharomyces cerevisiae YJM975 SNR76
    93. Saccharomyces cerevisiae YJM978 SNR76
    94. Saccharomyces cerevisiae YJM981 SNR76
    95. Saccharomyces cerevisiae YJM984 SNR76
    96. Saccharomyces cerevisiae YJM987 SNR76
    97. Saccharomyces cerevisiae YJM990 SNR76
    98. Saccharomyces cerevisiae YJM993 SNR76
    99. Saccharomyces cerevisiae YJM996 SNR76
    2D structure New