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Canis lupus familiaris (dog) cfa-miR-16 URS00004BCD9C_9615

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cfa-miR-16: Cfa-mir-16 is a microRNA that was used as a reference gene in a study [PMC9235276]. It was chosen as an endogenous reference gene due to its relatively stable expression [PMC7356535]. In the study, an amplification protocol was followed, consisting of specific temperature and time intervals [PMC9235276]. The expression levels of various miRNAs were evaluated, including cfa-miR-122, cfa-miR-885, cfa-miR-1, cfa-miR-133a/b, cfa-miR-208b, cfa-miR-499, cfa-miR-206, cfa-miR-212, cfa-miR-432, cfa-miR-34b/c, cfa-miR-216a/b, and others [PMC4989286]. Three miRNAs (cfa-mir-16,-29a,-186) were selected as normalization controls in the study due to their ubiquitous expression across all tissues [PMC4989286]. The precision of these three highly expressed ubiquitous miRNAs was measured and found to be good in all tissues examined [PMC4989286]. Another study enriched a panel of selected miRNAs with the inclusion of cmiRNA panel comprising of various miRNAs including cmiRNA 320 due to its stability in serum [PMC9951723]. In another analysis of canine miRNA expression patterns in CLL (chronic lymphocytic leukemia), the relative expression pattern of 12 canine miRNAs including mir16 was analyzed [PMC3619122]. Additionally,certain miRNAs including mir16 were selected for qRT PCR verification in another study[ PMC7689213]

Genome locations

Gene Ontology annotations

Sequence

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UAGCAGCACGUAAAUAUUGGCG

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This sequence is found in 37 other species

  1. Ateles geoffroyi age-miR-16
  2. Callithrix jacchus cja-miR-16
  3. Callorhinchus milii (elephant shark) eshark_mir-15_1
  4. Capra hircus (goat) miR-16
  5. Cervus elaphus (red deer) cel-miR-16b
  6. Chrysemys picta bellii Cpi-Mir-15-P2a_5p (mature (guide))
  7. Chrysemys picta (Painted turtle) cpi-miR-16a-5p
  8. Cricetulus griseus cgr-miR-16-5p
  9. Daubentonia madagascariensis dma-miR-16
  10. Equus caballus (horse) eca-miR-16
  11. Gorilla gorilla gorilla ggo-miR-16 (MIR16)
  12. Gorilla gorilla (western gorilla) ggo-miR-16
  13. Homo sapiens (human) hsa-miR-16-5p
  14. Lagothrix lagotricha lla-miR-16
  15. Macaca mulatta (Rhesus monkey) mml-miR-16-5p
  16. Macaca nemestrina mne-miR-16
  17. Maylandia zebra (zebra mbuna) mze-miR-16a
  18. Monodelphis domestica mdo-miR-16-5p
  19. Mus musculus mmu-miR-16-5p
  20. Nomascus leucogenys nle-miR-16
  21. Oreochromis niloticus (Nile tilapia) oni-miR-16a
  22. Ornithorhynchus anatinus (platypus) oan-miR-16a-5p
  23. Otolemur garnettii oga-miR-16
  24. Ovis aries (sheep) miscellaneous RNA
  25. Pan paniscus ppa-miR-16
  26. Pan troglodytes (chimpanzee) ptr-miR-16
  27. Papio hamadryas pha-miR-16
  28. Petromyzon marinus Pma-Mir-15-P2o1_5p (mature (guide))
  29. Pongo pygmaeus microRNA mir-16-1
  30. Pteropus alecto (black flying fox) pal-miR-16-5p
  31. Rattus norvegicus rno-miR-16-5p
  32. Saguinus labiatus sla-miR-16
  33. Saimiri boliviensis boliviensis sbo-miR-16
  34. Salmo salar (Atlantic salmon) ssa-miR-16c-5p
  35. Sarcophilus harrisii (Tasmanian devil) Sha-Mir-15-P2a_5p (mature (guide))
  36. Scyliorhinus torazame (cloudy catshark) Sto-Mir-15-P2b_5p (mature (guide))
  37. Sus scrofa ssc-miR-16
Publications