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Mus musculus (house mouse) mmu-miR-138-5p URS000040780F_10090

Automated summary: This miRNA sequence is 23 nucleotides long and is found in Mus musculus. Annotated by 6 databases (RefSeq, TarBase, MirGeneDB, ENA, PirBase, miRBase). Mus musculus (house mouse) mmu-miR-138-5p sequence is a product of miR-138, Mir138-2, Mir138-1, mmu-miR-138-5p, miR-138-5p, mmu-miR-138 genes. Found in the house mouse reference genome. Interacts with protein-coding genes, including (homologous Alu RNA binding protein), 0610007D13Rik, 0610010I05Rik, 0610011L13Rik, 0610042A05Rik, 0710001B06Rik, 0710001E10Rik, 0910001K20Rik, 1010001N11Rik, 1110001A03Rik.

Interactions 2

According to PSICQUIC, Mus musculus (house mouse) mmu-miR-138-5p interacts with:

Interaction id Participant Synonyms
URS000040780F_10090-0 E9PYH0 E9PYH0
URS000040780F_10090-1 E9PYH0 E9PYH0

Genome locations

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    Gene Ontology annotations


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    Taxonomic tree

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    This sequence is found in 51 other species

    1. Alligator mississippiensis Ami-Mir-138-P2_5p (mature (guide))
    2. Anolis carolinensis Aca-Mir-138-P2_5p (mature (guide))
    3. Bos taurus bta-miR-138
    4. Callorhinchus milii Cmi-Mir-138-P1_5p (mature (guide))
    5. Canis lupus familiaris (dog) cfa-miR-138a
    6. Cavia porcellus (domestic guinea pig) cpo-miR-138-5p
    7. Cervus elaphus (red deer) cel-miR-138
    8. Chrysemys picta bellii (western painted turtle) Cpi-Mir-138-P2_5p (mature (co-guide))
    9. Columba livia (rock pigeon) cli-miR-138-5p
    10. Danio rerio dre-miR-138-5p
    11. Dasypus novemcinctus dno-miR-138-5p
    12. Echinops telfairi Ete-Mir-138-P2_5p (mature (guide))
    13. Eptatretus burgeri (inshore hagfish) Ebu-Mir-138-P4_5p (mature (guide))
    14. Equus caballus eca-miR-138
    15. Gadus morhua (Atlantic cod) Gmo-Mir-138-P1b_5p (mature (guide))
    16. Gallus gallus (chicken) Gga-Mir-138-P2_5p (mature (guide))
    17. Gekko japonicus Gja-Mir-138-P2_5p (mature (guide))
    18. Gorilla gorilla ggo-miR-138
    19. Haplochromis burtoni (Burton's mouthbrooder) abu-miR-138
    20. Homo sapiens (human) hsa-miR-138-5p
    21. Ictalurus punctatus ipu-miR-138
    22. Latimeria chalumnae Lch-Mir-138-P2_5p (mature (guide))
    23. Lepisosteus oculatus Loc-Mir-138-P2_5p (mature (guide))
    24. Macaca fascicularis (crab-eating macaque) microRNA miR-138-5p
    25. Macaca mulatta (Rhesus monkey) mml-miR-138-5p
    26. Maylandia zebra (zebra mbuna) mze-miR-138
    27. Microcaecilia unicolor Mun-Mir-138-P1_5p (mature (guide))
    28. Microcebus murinus (gray mouse lemur) mmr-miR-138
    29. Monodelphis domestica (gray short-tailed opossum) Mdo-Mir-138-P2_5p (mature (guide))
    30. Monopterus albus Mal-Mir-138-P2_5p (mature (guide))
    31. Neolamprologus brichardi nbr-miR-138
    32. Ophiophagus hannah oha-miR-138-5p
    33. Oreochromis niloticus (Nile tilapia) oni-miR-138
    34. Ornithorhynchus anatinus oan-miR-138-5p
    35. Oryctolagus cuniculus (rabbit) ocu-miR-138-5p
    36. Otolemur garnettii oga-miR-138
    37. Pan troglodytes (chimpanzee) ptr-miR-138
    38. Petromyzon marinus (sea lamprey) pma-miR-138a
    39. Pongo pygmaeus ppy-miR-138
    40. Pteropus alecto pal-miR-138-5p
    41. Pundamilia nyererei pny-miR-138
    42. Python bivittatus pbv-miR-138-5p
    43. Rattus norvegicus (Norway rat) rno-miR-138-5p
    44. Salmo salar ssa-miR-138-5p
    45. Sarcophilus harrisii sha-miR-138
    46. Scyliorhinus torazame Sto-Mir-138-P1_5p (mature (guide))
    47. Sphenodon punctatus (tuatara) Spt-Mir-138-P2_5p (mature (guide))
    48. Taeniopygia guttata (zebra finch) tgu-miR-138-5p
    49. Tetraodon nigroviridis Tni-Mir-138-P2_5p (mature (guide))
    50. Xenopus laevis (African clawed frog) xla-miR-138-5p
    51. Xenopus tropicalis (tropical clawed frog) Xtr-Mir-138-P1_5p (mature (guide))
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