Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.
Caenorhabditis elegans lsy-6 stem-loop (cel-lsy-6) secondary structure diagram

Caenorhabditis elegans lsy-6 stem-loop (cel-lsy-6) URS00003F8B2D_6239

Automated summary: This pre miRNA sequence is 73 nucleotides long and is found in Caenorhabditis elegans. Annotated by 4 databases (miRBase, ENA, RefSeq, WormBase). Described in 7 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (lsy-6, RF00823). Caenorhabditis elegans lsy-6 stem-loop (cel-lsy-6) sequence is a product of microRNA lsy-6, lsy-6, lsy-6 precurso, cel-lsy-6 precursor, lsy-6 precursor, pre-microRNA lsy-6 genes. Found in the Caenorhabditis elegans reference genome.

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{'EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations


    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset


    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    2D structure New