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Saccharomyces cerevisiae YJM1133 RUF21 secondary structure diagram

Saccharomyces cerevisiae YJM1133 RUF21 URS00003B07A3_1294333

  • 707 nucleotides
  • 1 database (ENA)
  • Found in 12 species
  • ncRNA

Automated summary: This sRNA sequence is 707 nucleotides long and is found in Saccharomyces cerevisiae YJM1133. Annotated by 1 database (ENA). Described in 1 paper. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (RUF21, RF01825).

Genome locations

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GUUUUCCAUUUUCUUGAAAUUAAAAAGAAAAAAAACCGAAAUAAUGAAAAAUUCGGGGUUAGCCUUUGCCAAAGUGUACCCACCCACAAUUUACCCAGAAUUUUUAUUCAUGCAACCCCAGAUCACUGAAUACGAAAUGUAUAUCAUUUUUCACGCGGGGUUCCAACUAUGGCGGCUAGAUGAUGAAGGAAUAACAAGCAACGUACUGCUAAAUAAAAGGACUGAAGCAGCGUAUUGUUGAUAAUCAGACCUAUGCUUGGUACAAAAUUGUAAUGGAAUUAUGGAAAUCACAAUAUAAAACACAGUUUUUUGUUCAUGAUUAGUUCUCAACAAAAUUCUGGGGAAACAGGUAGAAUACCAUAAGCACCGCUUCCACAAUCAUCAACAUGUUGUAAUCUUCUUUCUUUGGAAGCAGCAGUCCUUUAUUACUUUUCUUUUAGUAAAUCCCUGAUCUGCGUAAUAUUGCAAGUUCUUUUUUAUCGGCCUCCUUAUAUAUAUAUAUAUAUAUAUAUAUAUCUAUAUUCACUAAUACUCGGGGUGUUUUUUUUUUUUUUAGCCGCUGAAGUGAGGAUCAAAAAUCAAUAGCUCGGAAGGUUAAAGGUUGUUAAGAUAGUAUAUACAUAUAUAUGUACAUAUACAUAUACAUAUAUAUAUUUUGAAUUACAUACUUCAGUAGGGAAUGGUAUAAAUUUUUUCGUACGGUAAUA

    Taxonomic tree

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    This sequence is found in 11 other species

    1. Marmota marmota marmota (Alpine marmot) sRNA (ENSMMMG00000000327.1)
    2. Saccharomyces cerevisiae (baker's yeast) RUF21
    3. Saccharomyces cerevisiae S288C RNA of Unknown Function
    4. Saccharomyces cerevisiae YJM1208 RUF21
    5. Saccharomyces cerevisiae YJM1304 RUF21
    6. Saccharomyces cerevisiae YJM1381 RUF21
    7. Saccharomyces cerevisiae YJM320 RUF21
    8. Saccharomyces cerevisiae YJM451 RUF21
    9. Saccharomyces cerevisiae YJM541 RUF21
    10. Saccharomyces cerevisiae YJM555 RUF21
    2D structure New