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Populus trichocarpa (black cottonwood) ptc-miR396b URS000039FDDC_3694

Automated summary: This miRNA sequence is 21 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Populus trichocarpa (black cottonwood) ptc-miR396b sequence is a product of ptc-miR396a, miR396, miR396a genes. Found in the Populus trichocarpa reference genome.

Genome locations

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    Gene Ontology annotations


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    Taxonomic tree

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    This sequence is found in 41 other species

    1. Acacia auriculiformis aau-miR396
    2. Acacia mangium amg-miR396
    3. Aegilops tauschii ata-miR396e-5p
    4. Ananas comosus (pineapple) vvi-miR396d
    5. Aquilegia coerulea aqc-miR396a
    6. Arabidopsis lyrata aly-miR396a-5p
    7. Arabidopsis thaliana (thale cress) ath-miR396a-5p
    8. Asparagus officinalis (garden asparagus) aof-miR396b
    9. Brachypodium distachyon (stiff brome) bdi-miR396d-5p
    10. Bruguiera cylindrica bcy-miR396a
    11. Bruguiera gymnorhiza bgy-miR396a
    12. Camelina sativa cas-miR396a
    13. Carica papaya cpa-miR396
    14. Citrus sinensis (sweet orange) csi-miR396a-5p
    15. Cucumis melo (muskmelon) cme-miR396b
    16. Digitalis purpurea dpr-miR396
    17. Eugenia uniflora eun-miR396b-5p
    18. Fragaria vesca subsp. vesca fve-miR396a-5p
    19. Glycine max (soybean) gma-miR396i-5p
    20. Gossypium hirsutum (cotton) ghr-miR396b
    21. Helianthus annuus ath-miR396a-5p
    22. Hevea brasiliensis hbr-miR396b
    23. Linum usitatissimum lus-miR396c
    24. Lotus japonicus lja-miR396
    25. Malus domestica mdm-miR396b
    26. Manihot esculenta mes-miR396b
    27. Medicago truncatula (barrel medic) mtr-miR396b-5p
    28. Nicotiana attenuata microRNA mir-396-like
    29. Nicotiana tabacum nta-miR396a
    30. Oryza sativa Japonica Group (Japanese rice) microRNA osa-miR396b-5p
    31. Oryza sativa (rice) osa-miR396a-5p
    32. Populus tomentosa Pto-miR396b
    33. Rosa chinensis ath-miR396a-5p
    34. Saccharum officinarum sof-miR396
    35. Saccharum sp. ssp-miR396
    36. Salvia sclarea ssl-miR396
    37. Solanum lycopersicum (tomato) sly-miR396a-5p
    38. Sorghum bicolor (sorghum) sbi-miR396b
    39. Theobroma cacao (cacao) tcc-miR396b
    40. Vitis vinifera (wine grape) vvi-miR396d
    41. Zea mays zma-miR396b-5p