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Mus musculus (house mouse) TARBASE:mmu-miR-222-3p URS00002C6949_10090

Automated summary: This piRNA sequence is 21 nucleotides long and is found in Mus musculus. Annotated by 5 databases (ENA, PSICQUIC, PirBase, LncBase, TarBase). Described in 8 papers. Mus musculus (house mouse) TARBASE:mmu-miR-222-3p sequence is a product of miR-222, mmu-miR-222, miR-222-3p, mmu-miR-222-3p genes. Interacts with lncRNAs, such as (). Interacts with protein-coding genes, including 0610009M14Rik, 0610010K06Rik, 0610043B10Rik, 0710001G09Rik, 0710005M05Rik, 0910001K20Rik, 100kDa, 1100001I19Rik, 1110001M19Rik, 1110001P04Rik.

Interactions 16

According to PSICQUIC, Mus musculus (house mouse) TARBASE:mmu-miR-222-3p interacts with:

Interaction id Participant Synonyms
URS00002C6949_10090-0 O54918 O54918
URS00002C6949_10090-8 O54918 O54918
URS00002C6949_10090-9 P15037 P15037
URS00002C6949_10090-1 P15037 P15037
URS00002C6949_10090-2 P23906 P23906
URS00002C6949_10090-10 P23906 P23906
URS00002C6949_10090-4 P27577 P27577
URS00002C6949_10090-3 P27577 P27577
URS00002C6949_10090-12 P27577 P27577
URS00002C6949_10090-11 P27577 P27577
URS00002C6949_10090-13 P40224 P40224
URS00002C6949_10090-5 P40224 P40224
URS00002C6949_10090-6 Q66JW3 Q66JW3
URS00002C6949_10090-14 Q66JW3 Q66JW3
URS00002C6949_10090-15 Q91ZE9 Q91ZE9
URS00002C6949_10090-7 Q91ZE9 Q91ZE9

Genome locations

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    Gene Ontology annotations

    Sequence

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    AGCUACAUCUGGCUACUGGGU

    Taxonomic tree

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    This sequence is found in 16 other species

    1. Bos taurus (cattle) bta-miR-222
    2. Canis lupus familiaris cfa-miR-222
    3. Equus caballus (horse) eca-miR-222
    4. Homo sapiens hsa-miR-222-3p
    5. Macaca mulatta mml-miR-222-3p
    6. Ornithorhynchus anatinus oan-miR-222a-3p
    7. Pongo pygmaeus ppy-miR-222
    8. Rattus norvegicus rno-miR-222-3p
    9. Sarcophilus harrisii sha-miR-222
    10. Tupaia chinensis tch-miR-222-3p
    11. Xenopus tropicalis Xenopus_tropicalis piRNA piR-xtr-3161177