v22

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Rattus norvegicus (Norway rat) rno-miR-29b-3p URS000024463E_10116

Automated summary: This piRNA sequence is 23 nucleotides long and is found in Rattus norvegicus. Annotated by 4 databases (miRBase, MirGeneDB, PirBase, RefSeq). Rattus norvegicus (Norway rat) rno-miR-29b-3p sequence is a product of miR-29b, miR-29, rno-miR-29b-3p, rno-miR-29b, miR-29b-3p, Mir29b-3, Mir29b2, Mir29b1 genes. Found in the Rattus norvegicus reference genome.

Interactions 8

According to PSICQUIC, Rattus norvegicus (Norway rat) rno-miR-29b-3p interacts with:

Interaction id Participant Synonyms
URS000024463E_10116-0 D3ZPM7 D3ZPM7
URS000024463E_10116-1 F1M9Z9 F1M9Z9
URS000024463E_10116-2 P02454 P02454
URS000024463E_10116-5 P02454 P02454
URS000024463E_10116-6 P08025 P08025
URS000024463E_10116-3 P08025 P08025
URS000024463E_10116-7 Q6P751 Q6P751
URS000024463E_10116-4 Q6P751 Q6P751

Genome locations

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    Gene Ontology annotations

    Sequence

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    UAGCACCAUUUGAAAUCAGUGUU

    Taxonomic tree

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    This sequence is found in 45 other species

    1. Alligator mississippiensis Ami-Mir-29-P1b-v1_3p (mature (guide))
    2. Anolis carolinensis (green anole) Aca-Mir-29-P1d-v1_3p (mature (guide))
    3. Artibeus jamaicensis (Jamaican fruit-eating bat) aja-miR-29b
    4. Bos taurus (cattle) bta-miR-29b
    5. Callithrix jacchus cja-miR-29b
    6. Callorhinchus milii Cmi-Mir-29-P1b_3p (mature (guide))
    7. Canis lupus familiaris cfa-miR-29b
    8. Cavia porcellus (domestic guinea pig) cpo-miR-29b-3p
    9. Chrysemys picta bellii (western painted turtle) Cpi-Mir-29-P1b-v1_3p (mature (guide))
    10. Columba livia cli-miR-29b-3p
    11. Cricetulus griseus cgr-miR-29b-3p
    12. Cyprinus carpio (common carp) ccr-miR-29b
    13. Danio rerio (zebrafish) dre-miR-29b3-3p
    14. Dasypus novemcinctus dno-miR-29b-3p
    15. Echinops telfairi Ete-Mir-29-P1b-v1_3p (mature (guide))
    16. Equus caballus eca-miR-29b
    17. Gallus gallus (chicken) gga-miR-29b-3p
    18. Gekko japonicus Gja-Mir-29-P1b-v1_3p (mature (guide))
    19. Homo sapiens (human) hsa-miR-29b-3p
    20. Latimeria chalumnae Lch-Mir-29-P1b_3p (mature (guide))
    21. Lepisosteus oculatus (spotted gar) Loc-Mir-29-P1b-v1_3p (mature (guide))
    22. Macaca mulatta (Rhesus monkey) mml-miR-29b-3p
    23. Maylandia zebra (zebra mbuna) mze-miR-29b
    24. Microcaecilia unicolor Mun-Mir-29-P1d-v1_3p (mature (guide))
    25. Microcebus murinus mmr-miR-29b
    26. Monodelphis domestica Mdo-Mir-29-P1b-v1_3p (mature (guide))
    27. Monopterus albus (swamp eel) Mal-Mir-29-P1d2-v1_3p (mature (guide))
    28. Mus musculus mmu-miR-29b-3p
    29. Neolamprologus brichardi nbr-miR-29b
    30. Nomascus leucogenys (northern white-cheeked gibbon) nle-miR-29b
    31. Ophiophagus hannah oha-miR-29b-3p
    32. Ornithorhynchus anatinus (platypus) Oan-Mir-29-P1b-v1_3p (mature (guide))
    33. Oryctolagus cuniculus ocu-miR-29b-3p
    34. Otolemur garnettii oga-miR-29b
    35. Pteropus alecto (black flying fox) pal-miR-29b-3p
    36. Python bivittatus Pbv-Mir-29-P1d-v1_3p (mature (guide))
    37. Saccoglossus kowalevskii Sko-Mir-29-P1_3p (mature (guide))
    38. Sarcophilus harrisii Sha-Mir-29-P1b-v1_3p (mature (guide))
    39. Scyliorhinus torazame (cloudy catshark) Sto-Mir-29-P1d_3p (mature (guide))
    40. Sphenodon punctatus Spt-Mir-29-P1b_3p (mature (guide))
    41. Sus scrofa ssc-miR-29b
    42. Taeniopygia guttata Tgu-Mir-29-P1b-v1_3p (mature (guide))
    43. Tupaia chinensis tch-miR-29b-3p
    44. Xenopus laevis (African clawed frog) xla-miR-29b-3p
    45. Xenopus tropicalis (tropical clawed frog) xtr-miR-29b
     Publications