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Populus trichocarpa (black cottonwood) ptc-miR396d URS00001D441B_3694

Automated summary: This miRNA sequence is 21 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Described in 1 paper. Populus trichocarpa (black cottonwood) ptc-miR396d sequence is a product of miR396d, ptc-miR396c, miR396c, miR396, ptc-miR396d genes. Found in the black cottonwood reference genome.

Genome locations

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    Gene Ontology annotations


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    Taxonomic tree

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    This sequence is found in 58 other species

    1. Aegilops tauschii ata-miR396c-5p
    2. Amborella trichopoda atr-miR396e
    3. Ananas comosus (pineapple) sbi-miR396c
    4. Aquilegia coerulea aqc-miR396b
    5. Arabidopsis lyrata aly-miR396b-5p
    6. Arabidopsis thaliana ath-miR396b-5p
    7. Avicennia marina ama-miR396-5p
    8. Brachypodium distachyon (stiff brome) bdi-miR396e-5p
    9. Brassica napus bna-miR396a
    10. Brassica rapa (field mustard) bra-miR396-5p
    11. Bruguiera cylindrica bcy-miR396b
    12. Bruguiera gymnorhiza bgy-miR396b
    13. Camelina sativa (false flax) cas-miR396b
    14. Citrus clementina ccl-miR396
    15. Citrus sinensis (sweet orange) csi-miR396f-5p
    16. Corchorus capsularis (jute) sRNA CCACVL1_27830
    17. Corchorus olitorius aau-miR3
    18. Cucumis melo cme-miR396d
    19. Cynara cardunculus cca-miR396a-5p
    20. Fragaria vesca subsp. vesca fve-miR396b-5p
    21. Glycine max gma-miR396b-5p
    22. Helianthus annuus sRNA HannXRQ_Chr04g0097915
    23. Hypericum perforatum Hyp-miR396
    24. Linum usitatissimum lus-miR396b
    25. Malus domestica (apple) mdm-miR396c
    26. Manihot esculenta (cassava) mes-miR396f
    27. Medicago truncatula mtr-miR396a-5p
    28. Nicotiana attenuata microRNA mir-396-like
    29. Nicotiana tabacum nta-miR396b
    30. Oryza sativa Japonica Group (Japanese rice) microRNA osa-miR396c-5p
    31. Oryza sativa osa-miR396c-5p
    32. Pachycladon cheesemanii Pch-miR396b
    33. Pachycladon fastigiatum Pfa-miR396b
    34. Picea abies (Norway spruce) pab-miR396h
    35. Pinus taeda pta-miR396
    36. Populus tomentosa Pto-miR396d
    37. Prunus persica (peach) ppe-miR396b
    38. Ricinus communis (castor bean) rco-miR396
    39. Rosa chinensis ath-miR396b-5p
    40. Solanum lycopersicum sly-miR396b
    41. Solanum tuberosum (potato) stu-miR396-5p
    42. Sorghum bicolor sbi-miR396c
    43. Theobroma cacao (cacao) tcc-miR396c
    44. Zea mays zma-miR396e-5p