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Escherichia coli str. K-12 substr. MG1655 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1) secondary structure diagram

Escherichia coli str. K-12 substr. MG1655 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1) URS00001BBAFC_511145

Automated summary: This tRNA sequence is 77 nucleotides long and is found in Escherichia coli str. K-12 substr. MG1655. Annotated by 2 databases (ENA, GtRNAdb). Described in 9 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (tRNA, RF00005). Escherichia coli str. K-12 substr. MG1655 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1) sequence is a product of tRNA-fMet-CAT-2-1, metY genes.

Genome locations

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    Gene Ontology annotations

    Sequence

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    CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAACCA

    Taxonomic tree

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    This sequence is found in 40 other species

    1. Acinetobacter pittii tRNA-Met
    2. Escherichia coli 3-373-03_S4_C1 tRNA-Met
    3. Escherichia coli 3-373-03_S4_C2 tRNA-Met
    4. Escherichia coli 3-373-03_S4_C3 tRNA-Met
    5. Escherichia coli BW25113 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    6. Escherichia coli BW2952 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    7. Escherichia coli DH1 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    8. Escherichia coli ER2796 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    9. Escherichia coli HT115 tRNA-Met
    10. Escherichia coli J53 tRNA-Met
    11. Escherichia coli K-12 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    12. Escherichia coli KLY tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    13. Escherichia coli NCTC 50110 tRNA-Met
    14. Escherichia coli O16:H48 tRNA-Met
    15. Escherichia coli S17 tRNA-Met
    16. Escherichia coli str. K-12 substr. DH10B tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    17. Escherichia coli str. K-12 substr. MC4100 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    18. Escherichia coli str. K-12 substr. MDS42 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    19. Escherichia coli str. K-12 substr. W3110 tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    20. Escherichia coli tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    21. Escherichia coli XH001 tRNA-Met
    22. Escherichia sp. Gen1 tRNA-Met
    23. Escherichia sp. TC-EC600-tetX4 tRNA-Met
    24. Escherichia sp. TM-G17TGC tRNA-Met
    25. Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 E-site tRNA from Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (PDB 6YTF, chain 7)
    26. synthetic construct FORMYL-METHIONYL-TRNAFMET2 from synthetic construct (PDB 2FMT, chain D)
    27. Klebsiella pneumoniae tRNA-Met(cat)
    28. Thermus thermophilus HB27 P-site tRNAfMET from Thermus thermophilus HB27 (PDB 4V4J, chain z)
    29. Thermus thermophilus P-tRNA from Thermus thermophilus (PDB 3J9Z, chain S6)
    30. Salmonella enterica subsp. enterica serovar Anatum tRNA-Met
    31. Salmonella enterica subsp. enterica serovar Copenhagen tRNA-Met
    32. Salmonella enterica subsp. enterica serovar Newport tRNA-Met
    33. Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella typhimurium) tRNA-Met
    34. Salmonella enterica subsp. enterica tRNA-Met
    35. Salmonella enterica tRNA-Met
    36. Salmonella sp. HNK130 tRNA-Met
    37. Shigella flexneri tRNA-Met
    38. Shigella sp. tRNA-Met
    39. synthetic Escherichia coli C321.deltaA tRNA-fMet (CAT) (tRNA-fMet-CAT-2-1)
    40. uncultured bacterium tRNA-Met
    41. Xanthomonas citri pv. citri tRNA-Met
    2D structure New