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Drosophila melanogaster (fruit fly) transfer RNA:Lysine-CTT 1-6 (multiple genes) secondary structure diagram

Drosophila melanogaster (fruit fly) transfer RNA:Lysine-CTT 1-6 (multiple genes) URS00001AD596_7227

Automated summary: This ncRNA sequence is 73 nucleotides long and is found in Drosophila melanogaster. Annotated by 4 databases (Rfam, GeneCards, ENA, FlyBase). Described in 17 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (tRNA, RF00005). Drosophila melanogaster (fruit fly) transfer RNA:Lysine-CTT 1-6 (multiple genes) sequence is a product of FBgn0052285, tRNA-Lys-CTT-1-11, tRNA:Lys-CTT-1-6, tRNA:Lys-CTT-1-8, tRNA:Lys-CTT-1-10, tRNA-Lys-CTT-1-13, tRNA:Lys-CTT-1-1, tRNA:Lys-CTT-1-9, tRNA-Lys-CTT-1-9, tRNA:Lys-CTT-1-2, tRNA-Lys-CTT-1-4, tRNA-Lys-CTT-1-2, FBgn0011893, FBgn0011895, tRNA-Lys-CTT-1-5, FBgn0011888, FBgn0011891, FBgn0011890, tRNA-Lys-CTT-1-3, tRNA:Lys-CTT-1-12, tRNA-Lys-CTT-1-6, tRNA:Lys-CTT-1-5, FBgn0011897, tRNA-Lys-CTT-1-10, FBgn0052272, FBgn0011894, tRNA:Lys-CTT-1-3, FBgn0011892, FBgn0011887, tRNA-Lys-CTT-1-8, tRNA:Lys-CTT-1-4, tRNA:Lys-CTT-1-7, FBgn0011896, tRNA:Lys-CTT-1-13, FBgn0011889, tRNA-Lys-CTT-1-7, tRNA:Lys-CTT-1-11, tRNA-Lys-CTT-1-12, tRNA-Lys-CTT-1-1 genes.

Genome locations

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GCCCGGCUAGCUCAGUCGGUAGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCG

    Taxonomic tree

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    This sequence is found in 246 other species

    1. Acanthisitta chloris tRNA
    2. Acinetobacter baumannii tRNA-Lys
    3. Acromyrmex echinatior tRNA
    4. Aedes aegypti misc RNA AAEL028759.1
    5. Aedes albopictus misc RNA tRNA-Lys
    6. Agrilus planipennis tRNA
    7. Ailuropoda melanoleuca tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 9)
    8. Alligator mississippiensis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1-1, tRNA-Lys-CTT-1-2)
    9. Alosa alosa tRNA-Lys
    10. Amazona aestiva tRNA
    11. Ameiurus melas (black bullhead) tRNA-Lys
    12. Amphimedon queenslandica tRNA-Lys for anticodon CUU
    13. Anas platyrhynchos tRNA
    14. Anguilla anguilla (European eel) tRNA-Lys
    15. Anolis carolinensis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    16. Anopheles albimanus misc RNA tRNA-Lys
    17. Anopheles arabiensis misc RNA tRNA-Lys
    18. Anopheles atroparvus tRNA
    19. Anopheles christyi misc RNA tRNA-Lys
    20. Anopheles coluzzii tRNA-Lys for anticodon CUU
    21. Anopheles culicifacies misc RNA tRNA-Lys
    22. Anopheles darlingi misc RNA ADAC010877.1
    23. Anopheles dirus misc RNA tRNA-Lys
    24. Anopheles epiroticus misc RNA tRNA-Lys
    25. Anopheles farauti tRNA
    26. Anopheles funestus tRNA-Lys for anticodon CUU
    27. Anopheles gambiae (African malaria mosquito) misc RNA tRNA-Lys
    28. Anopheles gambiae str. PEST tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 16)
    29. Anopheles maculatus misc RNA tRNA-Lys
    30. Anopheles melas misc RNA tRNA-Lys
    31. Anopheles merus misc RNA tRNA-Lys
    32. Anopheles minimus misc RNA tRNA-Lys
    33. Anopheles quadriannulatus misc RNA tRNA-Lys
    34. Anopheles sinensis misc RNA tRNA-Lys
    35. Anopheles stephensi misc RNA tRNA-Lys
    36. Anoplophora glabripennis tRNA-Lys for anticodon CUU
    37. Apaloderma vittatum tRNA
    38. Apis mellifera tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    39. Aplysia californica tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 13)
    40. Aptenodytes forsteri tRNA
    41. Araneus ventricosus tRNA-Lys
    42. Astyanax mexicanus tRNA
    43. Atta cephalotes (leaf-cutter ant) tRNA LOC105616958-2
    44. Atta colombica tRNA
    45. Balaenoptera acutorostrata scammoni tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 5)
    46. Balearica regulorum gibbericeps tRNA
    47. Biomphalaria glabrata misc RNA tRNA-Lys
    48. Bombus impatiens tRNA-Lys for anticodon CUU
    49. Bombus terrestris tRNA LOC110119275
    50. Bombyx mori tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    51. Bos taurus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 15)
    52. Buceros rhinoceros silvestris tRNA
    53. Callipepla squamata tRNA
    54. Callithrix jacchus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2 1 to 4)
    55. Callorhinchus milii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    56. Calypte anna tRNA
    57. Camelus ferus tRNA
    58. Camponotus floridanus tRNA
    59. Canis lupus familiaris tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    60. Capitella teleta tRNA-Lys for anticodon CUU
    61. Antrostomus carolinensis tRNA
    62. Cariama cristata tRNA
    63. Carlito syrichta tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1-1)
    64. Cathartes aura tRNA
    65. Cavia porcellus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 7)
    66. Ceratitis capitata tRNA-Lys
    67. Ceratotherium simum simum tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    68. Chaetura pelagica tRNA
    69. Charadrius vociferus tRNA
    70. Chelonia mydas tRNA
    71. Chlamydotis macqueenii tRNA
    72. Chlorocebus sabaeus tRNA
    73. Choloepus hoffmanni tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    74. Chrysemys picta bellii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1-1, tRNA-Lys-CTT-1-2)
    75. Cimex lectularius (bed bug) misc RNA tRNA-Lys
    76. Clytia hemisphaerica tRNA-Lys for anticodon CUU
    77. Colinus virginianus tRNA
    78. Colius striatus tRNA
    79. Columba livia (rock pigeon) partial tRNA-Lys
    80. Corvus brachyrhynchos tRNA
    81. Cricetulus griseus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    82. Cuculus canorus tRNA
    83. Culex quinquefasciatus (southern house mosquito) misc RNA tRNA-Lys
    84. Cyphomyrmex costatus tRNA
    85. Danaus plexippus (monarch butterfly) tRNA-Lys for anticodon CUU
    86. Danaus plexippus plexippus tRNA
    87. Danionella translucida tRNA-Lys
    88. Danio rerio tRNA
    89. Daphnia galeata transfer RNA
    90. Daphnia magna str. Xinb3 tRNA-Lys for anticodon CUU
    91. Daphnia pulex tRNA-Lys for anticodon CUU
    92. Dasypus novemcinctus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 12)
    93. Dendroctonus ponderosae tRNA-Lys for anticodon CUU
    94. Dipodomys ordii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    95. Drosophila ananassae tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 13)
    96. Drosophila busckii tRNA
    97. Drosophila erecta tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 11)
    98. Drosophila ficusphila tRNA
    99. Drosophila grimshawi tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 11)
    100. Drosophila guanche tRNA.Lys
    101. Drosophila mojavensis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    102. Drosophila persimilis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 12)
    103. Drosophila pseudoobscura pseudoobscura tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 12)
    104. Drosophila sechellia tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 11)
    105. Drosophila simulans tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 12)
    106. Drosophila virilis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 11)
    107. Drosophila willistoni tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    108. Drosophila yakuba tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 13)
    109. Dufourea novaeangliae tRNA
    110. Echinops telfairi tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 7)
    111. Egretta garzetta tRNA
    112. Equus caballus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 8)
    113. Erinaceus europaeus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 11)
    114. Eschrichtius robustus tRNA-Lys
    115. Eumeta japonica tRNA-Lys
    116. Eurypyga helias tRNA
    117. Felis catus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    118. Frieseomelitta varia tRNA-Lys
    119. Fukomys damarensis tRNA
    120. Fulmarus glacialis tRNA
    121. Gadus morhua tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 19)
    122. Gallus gallus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2 1 to 4)
    123. Gasterosteus aculeatus tRNA
    124. Gavia stellata tRNA
    125. Geospiza fortis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 3)
    126. Glossina austeni misc RNA tRNA-Lys
    127. Glossina brevipalpis misc RNA tRNA-Lys
    128. Glossina fuscipes fuscipes tRNA
    129. Glossina morsitans morsitans tRNA
    130. Glossina pallidipes misc RNA tRNA-Lys
    131. Glossina palpalis gambiensis misc RNA tRNA-Lys
    132. Gorilla gorilla gorilla tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 8, tRNA-Lys-CTT-2 1 to 7)
    133. Habropoda laboriosa tRNA
    134. Haliaeetus albicilla tRNA
    135. Harpegnathos saltator tRNA
    136. Heliconius melpomene (postman butterfly) tRNA HMEL015982
    137. Helobdella robusta (freshwater leech) tRNA-Lys for anticodon CUU
    138. Heterocephalus glaber tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 5)
    139. Hippoglossus stenolepis tRNA-Lys
    140. Homo sapiens tRNA-Lys (anticodon CTT) 2-5
    141. Ictidomys tridecemlineatus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 7)
    142. Ixodes scapularis (black-legged tick) tRNA-Lys for anticodon CUU
    143. Lamprotornis superbus tRNA-OTHER
    144. Larimichthys crocea tRNA
    145. Lasius niger tRNA
    146. Latimeria chalumnae tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1-1)
    147. Lepisosteus oculatus tRNA
    148. Loxodonta africana tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 5)
    149. Lucilia cuprina tRNA-Lys for anticodon CUU
    150. Lutzomyia longipalpis misc RNA tRNA-Lys
    151. Macaca mulatta tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1-1, tRNA-Lys-CTT-1-3, tRNA-Lys-CTT-1-4, tRNA-Lys-CTT-1 6 to 9)
    152. Manacus vitellinus tRNA
    153. Marmota monax tRNA.Lys
    154. Megaselia scalaris tRNA-Lys for anticodon CUU
    155. Meleagris gallopavo tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    156. Melipona quadrifasciata tRNA
    157. Melopsittacus undulatus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 3)
    158. Merops nubicus tRNA
    159. Mesitornis unicolor tRNA
    160. Mesocricetus auratus tRNA
    161. Microcebus murinus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    162. Monodelphis domestica tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 10)
    163. Musca domestica (house fly) misc RNA MDOA012697.1
    164. Mus musculus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-3 1 to 7)
    165. Mustela putorius furo tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    166. Myotis brandtii tRNA
    167. Myotis davidii tRNA
    168. Myotis lucifugus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    169. Nasonia vitripennis tRNA-Lys
    170. Neotoma lepida tRNA
    171. Nestor notabilis tRNA
    172. Nipponia nippon tRNA
    173. Nomascus leucogenys tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2 1 to 7)
    174. Notamacropus eugenii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 8)
    175. Ochotona princeps tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    176. Ooceraea biroi tRNA
    177. Operophtera brumata tRNA
    178. Ophiophagus hannah tRNA
    179. Opisthocomus hoazin tRNA
    180. Orchesella cincta tRNA
    181. Oreochromis niloticus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 21)
    182. Ornithorhynchus anatinus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 9)
    183. Oryctes borbonicus tRNA
    184. Oryctolagus cuniculus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 8)
    185. Oryzias latipes tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 8)
    186. Otolemur garnettii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    187. Ovis aries tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 12)
    188. Pangasianodon hypophthalmus tRNA-Lys
    189. Pan troglodytes tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2 1 to 7, tRNA-Lys-CTT-2 9 to 13)
    190. Papilio machaon tRNA
    191. Papilio xuthus tRNA
    192. Papio anubis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2 1 to 6)
    193. Paramuricea clavata tRNA.Lys
    194. Patagioenas fasciata monilis tRNA
    195. Pediculus humanus corporis misc RNA tRNA-Lys
    196. Pelecanus crispus tRNA
    197. Pelodiscus sinensis tRNA
    198. Perca flavescens (yellow perch) tRNA-Lys
    199. Perca fluviatilis (European perch) tRNA-Lys
    200. Petromyzon marinus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 12)
    201. Phaethon lepturus tRNA
    202. Phalacrocorax carbo tRNA
    203. Phlebotomus papatasi misc RNA tRNA-Lys
    204. Phoenicopterus ruber ruber tRNA
    205. Dryobates pubescens tRNA
    206. Poecilia formosa tRNA
    207. Pongo abelii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-3 1 to 4, tRNA-Lys-CTT-3 6 to 8)
    208. Procavia capensis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    209. Pterocles gutturalis tRNA
    210. Pteropus alecto tRNA
    211. Pygoscelis adeliae tRNA
    212. Rattus norvegicus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 9)
    213. Rhodnius prolixus misc RNA tRNA-Lys
    214. Saimiri boliviensis boliviensis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2 1 to 4)
    215. Salmo salar tRNA
    216. Sarcophilus harrisii tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 9)
    217. Sarcoptes scabiei misc RNA tRNA-Lys
    218. Scleropages formosus tRNA
    219. Scophthalmus maximus tRNA.Lys
    220. Solenopsis invicta tRNA-Lys
    221. Sorex araneus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 7)
    222. Stomoxys calcitrans (stable fly) tRNA-Lys
    223. Struthio camelus australis tRNA
    224. Sus scrofa tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 6)
    225. Taeniopygia guttata tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-2-1)
    226. Takifugu rubripes tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 14)
    227. Tauraco erythrolophus tRNA
    228. Teleopsis dalmanni tRNA-Lys for anticodon CUU
    229. Tetraodon nigroviridis tRNA
    230. Tinamus guttatus tRNA
    231. Trachymyrmex cornetzi tRNA
    232. Trachymyrmex septentrionalis tRNA
    233. Trachymyrmex zeteki tRNA
    234. Tribolium castaneum tRNA
    235. Trichechus manatus latirostris tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 7)
    236. Trichomalopsis sarcophagae tRNA
    237. Tropilaelaps mercedesae tRNA
    238. Tupaia chinensis tRNA
    239. Tursiops truncatus tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 4)
    240. Tyto alba tRNA
    241. uncultured Gammaproteobacteria bacterium transfer RNA
    242. Varroa destructor (honeybee mite) tRNA-Lys
    243. Vicugna pacos tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 8)
    244. Xenopus laevis tRNA
    245. Xenopus tropicalis tRNA Lysine with anticodon CTT (tRNA-Lys-CTT-1 1 to 83)
    246. Xiphophorus maculatus tRNA
    247. Zootermopsis nevadensis tRNA-Lys for anticodon CUU
    2D structure New