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Saccharomyces cerevisiae S288C tRNA Tyrosine with anticodon GTA (tRNA-Tyr-GTA-1 1 to 8) secondary structure diagram

Saccharomyces cerevisiae S288C tRNA Tyrosine with anticodon GTA (tRNA-Tyr-GTA-1 1 to 8) URS00000E5CD1_559292

Automated summary: This ncRNA sequence is 75 nucleotides long and is found in Saccharomyces cerevisiae S288C. Annotated by 2 databases (ENA, IntAct). Described in 11 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (tRNA, RF00005). Saccharomyces cerevisiae S288C tRNA Tyrosine with anticodon GTA (tRNA-Tyr-GTA-1 1 to 8) sequence is a product of tRNA-Tyr-GTA-1-1, tRNA-Tyr-GTA-1-2, SUP11, tRNA-Tyr-GTA-1-7, tRNA-Tyr-GTA-1-8, tRNA-Tyr-GTA-1-4, SUP6, tRNA-Tyr-GTA-1-5, SUP7, tRNA-Tyr-GTA-1-6, SUP4, SUP5, SUP8, SUP3, SUP2, tRNA-Tyr-GTA-1-3 genes. Found in the Saccharomyces cerevisiae S288C reference genome.

Interactions 2

According to IntAct, Saccharomyces cerevisiae S288C tRNA Tyrosine with anticodon GTA (tRNA-Tyr-GTA-1 1 to 8) interacts with:

IntAct ID Participant Synonyms
EBI-12517648 P38205 D6VPX6 EBI-11933 Multisite-specific tRNA:m5C-methyltransferase NCL1 P38205 TRM4 YBL024W YBL0437 ncl1_yeast tRNA (cytosine-5-)-methyltransferase NCL1 tRNA methyltransferase 4
EBI-11701625 Q08647 D6W2U5 EBI-29265 O5254 PUS7 Q08647 RNA pseudouridylate synthase 7 RNA-uridine isomerase 7 YOR243C pus7_yeast tRNA pseudouridine(13) synthase

Genome locations

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    CUCUCGGUAGCCAAGUUGGUUUAAGGCGCAAGACUGUAAAUCUUGAGAUCGGGCGUUCGACUCGCCCCCGGGAGA

    Taxonomic tree

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    This sequence is found in 95 other species

    1. Saccharomyces cerevisiae (baker's yeast) Tyr-tRNA SUP11
    2. Saccharomyces cerevisiae P283 tRNA-Tyr
    3. Saccharomyces cerevisiae PE-2 tRNA-Tyr
    4. Saccharomyces cerevisiae YJM1078 tRNA-Tyr
    5. Saccharomyces cerevisiae YJM1083 tRNA-Tyr
    6. Saccharomyces cerevisiae YJM1129 tRNA-Tyr
    7. Saccharomyces cerevisiae YJM1133 tRNA-Tyr
    8. Saccharomyces cerevisiae YJM1190 tRNA-Tyr
    9. Saccharomyces cerevisiae YJM1199 tRNA-Tyr
    10. Saccharomyces cerevisiae YJM1202 tRNA-Tyr
    11. Saccharomyces cerevisiae YJM1208 tRNA-Tyr
    12. Saccharomyces cerevisiae YJM1242 tRNA-Tyr
    13. Saccharomyces cerevisiae YJM1244 tRNA-Tyr
    14. Saccharomyces cerevisiae YJM1248 tRNA-Tyr
    15. Saccharomyces cerevisiae YJM1250 tRNA-Tyr
    16. Saccharomyces cerevisiae YJM1252 tRNA-Tyr
    17. Saccharomyces cerevisiae YJM1273 tRNA-Tyr
    18. Saccharomyces cerevisiae YJM1304 tRNA-Tyr
    19. Saccharomyces cerevisiae YJM1307 tRNA-Tyr
    20. Saccharomyces cerevisiae YJM1311 tRNA-Tyr
    21. Saccharomyces cerevisiae YJM1326 tRNA-Tyr
    22. Saccharomyces cerevisiae YJM1332 tRNA-Tyr
    23. Saccharomyces cerevisiae YJM1336 tRNA-Tyr
    24. Saccharomyces cerevisiae YJM1338 tRNA-Tyr
    25. Saccharomyces cerevisiae YJM1341 tRNA-Tyr
    26. Saccharomyces cerevisiae YJM1342 tRNA-Tyr
    27. Saccharomyces cerevisiae YJM1355 tRNA-Tyr
    28. Saccharomyces cerevisiae YJM1356 tRNA-Tyr
    29. Saccharomyces cerevisiae YJM1381 tRNA-Tyr
    30. Saccharomyces cerevisiae YJM1383 tRNA-Tyr
    31. Saccharomyces cerevisiae YJM1385 tRNA-Tyr
    32. Saccharomyces cerevisiae YJM1386 tRNA-Tyr
    33. Saccharomyces cerevisiae YJM1387 tRNA-Tyr
    34. Saccharomyces cerevisiae YJM1388 tRNA-Tyr
    35. Saccharomyces cerevisiae YJM1389 tRNA-Tyr
    36. Saccharomyces cerevisiae YJM1399 tRNA-Tyr
    37. Saccharomyces cerevisiae YJM1400 tRNA-Tyr
    38. Saccharomyces cerevisiae YJM1401 tRNA-Tyr
    39. Saccharomyces cerevisiae YJM1402 tRNA-Tyr
    40. Saccharomyces cerevisiae YJM1415 tRNA-Tyr
    41. Saccharomyces cerevisiae YJM1417 tRNA-Tyr
    42. Saccharomyces cerevisiae YJM1418 tRNA-Tyr
    43. Saccharomyces cerevisiae YJM1419 tRNA-Tyr
    44. Saccharomyces cerevisiae YJM1433 tRNA-Tyr
    45. Saccharomyces cerevisiae YJM1434 tRNA-Tyr
    46. Saccharomyces cerevisiae YJM1439 tRNA-Tyr
    47. Saccharomyces cerevisiae YJM1443 tRNA-Tyr
    48. Saccharomyces cerevisiae YJM1444 tRNA-Tyr
    49. Saccharomyces cerevisiae YJM1447 tRNA-Tyr
    50. Saccharomyces cerevisiae YJM1450 tRNA-Tyr
    51. Saccharomyces cerevisiae YJM1460 tRNA-Tyr
    52. Saccharomyces cerevisiae YJM1463 tRNA-Tyr
    53. Saccharomyces cerevisiae YJM1477 tRNA-Tyr
    54. Saccharomyces cerevisiae YJM1478 tRNA-Tyr
    55. Saccharomyces cerevisiae YJM1479 tRNA-Tyr
    56. Saccharomyces cerevisiae YJM1526 tRNA-Tyr
    57. Saccharomyces cerevisiae YJM1527 tRNA-Tyr
    58. Saccharomyces cerevisiae YJM1549 tRNA-Tyr
    59. Saccharomyces cerevisiae YJM1573 tRNA-Tyr
    60. Saccharomyces cerevisiae YJM1574 tRNA-Tyr
    61. Saccharomyces cerevisiae YJM1592 tRNA-Tyr
    62. Saccharomyces cerevisiae YJM1615 tRNA-Tyr
    63. Saccharomyces cerevisiae YJM189 tRNA-Tyr
    64. Saccharomyces cerevisiae YJM193 tRNA-Tyr
    65. Saccharomyces cerevisiae YJM195 tRNA-Tyr
    66. Saccharomyces cerevisiae YJM244 tRNA-Tyr
    67. Saccharomyces cerevisiae YJM248 tRNA-Tyr
    68. Saccharomyces cerevisiae YJM270 tRNA-Tyr
    69. Saccharomyces cerevisiae YJM271 tRNA-Tyr
    70. Saccharomyces cerevisiae YJM320 tRNA-Tyr
    71. Saccharomyces cerevisiae YJM326 tRNA-Tyr
    72. Saccharomyces cerevisiae YJM428 tRNA-Tyr
    73. Saccharomyces cerevisiae YJM450 tRNA-Tyr
    74. Saccharomyces cerevisiae YJM451 tRNA-Tyr
    75. Saccharomyces cerevisiae YJM453 tRNA-Tyr
    76. Saccharomyces cerevisiae YJM456 tRNA-Tyr
    77. Saccharomyces cerevisiae YJM470 tRNA-Tyr
    78. Saccharomyces cerevisiae YJM541 tRNA-Tyr
    79. Saccharomyces cerevisiae YJM554 tRNA-Tyr
    80. Saccharomyces cerevisiae YJM555 tRNA-Tyr
    81. Saccharomyces cerevisiae YJM627 tRNA-Tyr
    82. Saccharomyces cerevisiae YJM681 tRNA-Tyr
    83. Saccharomyces cerevisiae YJM682 tRNA-Tyr
    84. Saccharomyces cerevisiae YJM683 tRNA-Tyr
    85. Saccharomyces cerevisiae YJM689 tRNA-Tyr
    86. Saccharomyces cerevisiae YJM693 tRNA-Tyr
    87. Saccharomyces cerevisiae YJM969 tRNA-Tyr
    88. Saccharomyces cerevisiae YJM972 tRNA-Tyr
    89. Saccharomyces cerevisiae YJM975 tRNA-Tyr
    90. Saccharomyces cerevisiae YJM978 tRNA-Tyr
    91. Saccharomyces cerevisiae YJM981 tRNA-Tyr
    92. Saccharomyces cerevisiae YJM984 tRNA-Tyr
    93. Saccharomyces cerevisiae YJM987 tRNA-Tyr
    94. Saccharomyces cerevisiae YJM990 tRNA-Tyr
    95. Saccharomyces cerevisiae YJM993 tRNA-Tyr
    96. Saccharomyces cerevisiae YJM996 tRNA-Tyr
    2D structure New