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Leishmania major 18S ribosomal (SSU) RNA secondary structure diagram

Leishmania major 18S ribosomal (SSU) RNA URS00000900A9_347515

Automated summary: This rRNA sequence is 2,204 nucleotides long and is found in Leishmania major strain Friedlin. Annotated by 3 databases (ENA, SILVA, Ensembl Protists). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_eukarya, RF01960). Leishmania major 18S ribosomal (SSU) RNA sequence is a product of LMJF_27_rRNA_05, LMJF_27_rRNA_04, LMJFC_27.rRNA.0210, LMJF_27_rRNA_06, LMJF_27_rRNA_02, LMJF_27_rRNA_01, LMJF_27_rRNA_03 genes. Found in the Leishmania major strain Friedlin reference genome.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

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    GAUCUGGUUGAUUCUGCCAGUAGUCAUAUGCUUGUUUCAAGGACUUAGCCAUGCAUGCCUCAGAAUCACUGCAUUUGCAGGAAUCUGCGCAUGGCUCAUUACAUCAGACGUAAUCUGCCGCAAAAAUCUUGCGGUUUCCGCAAAAUUGGAUAACUUGGCGAAACGCCAAGCUAAUACAUGAACCAACCGGGUGUUCUCCACUCCAGACGGUGGGCAACCAUCGUCGUGAGACGCCCAGCGAAUGAAUGACAGUAAAACCAAUGCCUUCACUGGCAGUAACACCCAGCAGUGUUGACUCAAUUCAUUCCGUGCGAAAGCCGGCUUGUUCCGGCGUCUUUUGACGAACAACUGCCCUAUCAGCUGGUGAUGGCCGUGUAGUGGACUGCCAUGGCGUUGACGGGAGCGGGGGAUUAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAAUAGCUACCACUUCUACGGAGGGCAGCAGGCGCGCAAAUUGCCCAAUGUCAAAACAAAACGAUGAGGCAGCGAAAAGAAAUAGAGUUGUCAGUCCAUUUGGAUUGUCAUUUCAAUGGGGGAUAUUUAAACCCAUCCAAUAUCGAGUAACAAUUGGAGGACAAGUCUGGUGCCAGCACCCGCGGUAAUUCCAGCUCCAAAAGCGUAUAUUAAUGCUGUUGCUGUUAAAGGGUUCGUAGUUGAACUGUGGGCUGUGCAGGUUUGUUCCUGGUCGUCCCGUCCAUGUCGGAUUUGGUGACCCAGGCCCUUGCAGCCCGUGAACAUUCAAAGAAACAAGAAACACGGGAGUGGUUCCUUUCCUGAUUUACGCAUGUCAUGCAUGCCAGGGGGCGUCCGUGAUUUUUUACUGUGACUAAAGAAGCGUGACUAAAGCAGUCAUUUGACUUGAAUUAGAAAGCAUGGGAUAACAAAGGAGCAGCCUCUAGGCUACCGUUUCGGCUUUUGUUGGUUUUAAAGGUCUAUUGGAGAUUAUGGAGCUGUGCGACAAGUGCUUUCCCAUCGCAACUUCGGUUCGGUGUGUGGCGCCUUUGAGGGGUUUAGUGCGUCCGGUGCGAGCUCCGGUUCGUCCGGCCGUAACGCCUUUUCAACUCACGGCCUCUAGGAAUGAAGGAGGGUAGUUCGGGGGAGAACGUACUGGGGCGUCAGAGGUGAAAUUCUUAGACCGCACCAAGACGAACUACAGCGAAGGCAUUCUUCAAGGAUACCUUCCUCAAUCAAGAACCAAAGUGUGGAGAUCGAAGAUGAUUAGAGACCAUUGUAGUCCACACUGCAAACGAUGACACCCAUGAAUUGGGGAUCUUAUGGGCCGGCCUGCGGCAGGGUUUACCCUGUGUCAGCACCGCGCCCGCUUUUACCAACUUACGUAUCUUUUCUAUUCGGCCUUUACCGGCCACCCACGGGAAUAUCCUCAGCACGUUUUCUGUUUUUUCACGCGAAAGCUUUGAGGUUACAGUCUCAGGGGGGAGUACGUUCGCAAGAGUGAAACUUAAAGAAAUUGACGGAAUGGCACCACAAGACGUGGAGCGUGCGGUUUAAUUUGACUCAACACGGGGAACUUUACCAGAUCCGGACAGGAUGAGGAUUGACAGAUUGAGUGUUCUUUCUCGAUUCCCUGAAUGGUGGUGCAUGGCCGCUUUUGGUCGGUGGAGUGAUUUGUUUGGUUGAUUCCGUCAACGGACGAGAUCCAAGCUGCCCAGUAGAAUUCAGAAUUGCCCAUAGAAUAGCAAACUCAUCGGCGGGUUUUACCCAACGGUGGGCCGCAUUCGGUCGAAUUCUUCUCUGCGGGAUUCCUUUGUAAUUGCACAAGGUGAAAUUUUGGGCAACAGCAGGUCUGUGAUGCUCCUCAAUGUUCUGGGCGACACGCGCACUACAAUGUCAGUGAGAACAAGAAAAACGACUUUUGUCGAACCUACUUGAUCAAAAGAGUGGGGAAACCCCGGAAUCACAUAGACCCACUUGGGACCGAGGAUUGCAAUUAUUGGUCGCGCAACGAGGAAUGUCUCGUAGGCGCAGCUCAUCAAACUGUGCCGAUUACGUCCCUGCCAUUUGUACACACCGCCCGUCGUUGUUUCCGAUGAUGGUGCAAUACAGGUGAUCGGACAGGCGGUGUUUUAUCCGCCCGAAAGUUCACCGAUAUUUCUUCAAUAGAGGAAGCAAAAGUCGUAACAAGGUAGCUGUAGGUGAACCUGCAGCUGGAUCAUUUU

    Taxonomic tree

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    2D structure