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Flammeovirga aprica JL-4 16S ribosomal RNA secondary structure diagram

Flammeovirga aprica JL-4 16S ribosomal RNA URS0000050BAA_694437

Automated summary: This rRNA sequence is 1,452 nucleotides long and is found in Flammeovirga aprica JL-4. Annotated by 2 databases (RefSeq, Greengenes). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Flammeovirga aprica JL-4 16S ribosomal RNA sequence is a product of rrn gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 12 N  IUPAC notation

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GAUGAACGCUAGCGGCAGGCCUAAUACAUGCAAGUCGAGGGGUAACNNGNUCUGCUUGCAGANUGNNGACGACCGGCGCACGGGUGCGUAACGCGUAUACAACUUACCUUUAUCUGGAGGAUAGCCCGGAGAAAUUCGGAUUAAUACUCCAUAGUAUUAUAAAGUAGCAUUGCUUAAUAAUUAAAGAUUUAUCGGAUAAAGAUAGGUAUGCGUCCCAUUAGCUAGUUGGUGCAGGUAACGGCUCACCAAGGCGACGAUGGGUAGGGGUUCUGAGAGGAAGGUCCCCCACACUGGCACUGAGAUACGGGCCAGACUCCUACGGGAGGCAGCAGUAGGGAAUAUUGGUCAAUGGAGGCAACUCUGAACCAGCCAUGCCGCGUGAACGAUGAAGGCCUUCGGGUUGUAAAGUUCUUUUGUAUGGGAAGAAACUCANNCNUGCGNGNNUGCUUGACGGUACCAUAAGAAUAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUGUCCGGAAUUAUUGGGUUUAAAGGGUGCGCAGGCGGUUUUGUCAGUCAGAGGUUAAAGACCGGAGCUUAACUCCGAGUUUGCCUUUGAUACUGCAAGACUUGAAAUACAUAUGGGUAGGCGGAAUUCCUCAUGUAGCGGUGAAAUGCACAGAUAUGAGGAGGAAGACCGAAGGCGAAGGCAGCUUACUGGGUGUUAUUUGACGCUGAGGCACGAAAGCGUGGGGAGCGAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGAGAACUCGACCUGUGUGGUGUAACCAUGCGGGUCCAAGCGAAAGCGAGAAGUUCUCCACCUGGGGAGUACGCCGGCAACGGUGAAACUCAAAGGAAUUGACGGGGGUCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGAUACGCGAGGAACCUUACCUGGACUCGAAUUCGUUUUGACCGUUCUAGAGAUAGAACUUUCUUCGGACAGAAUGGAAGGUGCUGCAUGGCUGUCGUCAGCUCGUGCCGCGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUACUUCUAGUUGCCAUCAGGUUAUGCUGGGGACUCUAGAGGAACUGCCUGCGCAAGCAGAGAGGAAGGCGGGGACGACGUCAAGUCAUCAUGGCCCUUACGUCCAGGGCAACACACGUGCUACAAUGGUAGGGACAACGGGCAGCAAGCUAGCGAUAGUAAGCGAAUCUCGAAAACCCUAUCCCAGUUCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUUGGAAUCGCUAGUAAUCGCGCAUCAGCUAUGGCGCGGUGAAUACGUACCCGGACCUUGUACACACCGCCCGUCAAGCCAUGGAAGUUUGGUGGGCCUGAAGAUGGUGGCCAUUUAGGAGCUAUUUAGGGCAAAACAGAUAACUGGGGCUAAG

    Taxonomic tree

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    This sequence is found in 0 other species

    1. Flammeovirga aprica bacterial SSU rRNA
    2D structure New