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Brachybacterium faecium 23S ribosomal RNA secondary structure diagram

Brachybacterium faecium 23S ribosomal RNA URS000004E63B_43669

Automated summary: This rRNA sequence is 3,074 nucleotides long and is found in Brachybacterium faecium. Annotated by 1 database (RefSeq). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (LSU_rRNA_bacteria, RF02541).

Genome locations

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This sequence is found in {{ locations.length }} genome :

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  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    CCGUAAGUUUUAAAGGGCGCACGGUGGAUGCCUUGGCAAGAGGAGCCGACGAAGGACGUGGGAGUCUGCGUUAAGCCUCGGGGAGUUGACAACCGAACUGUGAUCCGAGGAUGUCCGAAUGGGGAAACCCACCACGAGUCAUGUCGUGGUACCCGCUGCUGAAUGUAUACGUGGCGUGGAGGGAACGCGGGGAAGUGAAACAUCUCAGUACCCGCAGGAAGAGAAAACAAUAGUGAUUCCGUGAGUAGUGGCGAGCGAAAUCGGAGUAGGCUAAACCUGGUCUGUGUGAUACCCGGCAGGGGUUGCAGGUUGGGGGUUGUGGGACGUGUCUGAUGGGUCUGCCGGCUCAUCGGCGUGGACGUGUAGUGGUAGUCGAAGUCGUGGUGAGUGCGACGGCGUAGAGGGUGUGACCCCCGUAGACGAAACUUCUGCAUGGCGCGACGCUGUUCCCGAGUAGCACCGGGCCCGUGAAAUCCGGUGUGAAUCUGCCAGGACCACCUGGUAAGCCUGAAUACUACCUCUUGACCGAUAGCGGACAAGUACCGUGAGGGAAAGGUGAAAAGCACCCCGGGAGGGGAGUGAAAUAGUACCUGAAACCGUGCGCUUACAAUCCGUCGGAGCCUUUUGGGGUGACGGCGUGCCUUUUGAAGAAUGAGCCUGCGAGUUAGUGGUCGGUGGCGAGGUUAACCCGUGUGGGGUAGCCGUAGCGAAAGCGAGUCUGAACGGGGCGUUCAGUCGCCGGCUCUAGACCCGAAGCGAAGUGAUCUAUCCAUGGGCAGUGUGAAGCGCGGGUAAGACCGCGUGGAGGCGCGAACCCACUUCAGUUGAAAAUGGAGGGGAUGACCUGUGGAUAGGGGUGAAAGGCCAAUCAAACUUCGUGAUAGCUGGUUCUCCCCGAAAUGCAUUUAGGUGCAGCGUUGCGUGUUUCGUACCGGAGGUAGAGCACUGGAUAGGCGAUGGGCCCCACCGGGCUACUGACCUUAGCCAAACUCCGAAUGCCGGUACGUGAGAGCGCAGCAGUGAGACUGUGGGGGAUAAGCUUCAUAGUCGAGAGGGAAACAGCCCAGAACAUCAGCUAAGGCCCCUAAGCGUGUGCUAAGUGGAAAAGGAUGUGGAGUUGCUGAGACAACCAGGAGGUUGGCUUAGAAGCAGCCACCCUUGAAAGAGUGCGUAAUAGCUCACUGGUCAAGUGAUUCUGCGCCGACAAUUUAGCGGGGCUCAAGCACACCGCCGAAGCUGUGUCACUCCGGUGUAUGCCGGGGUGGGUAGGGGAGCGUCGUGCAGCCGGUGAAGCCGCGGGGGAACCCAGUGGUGGAGGCUGUACGAGUGAGAAUGCAGGCAUGAGUAGCGAAAGACGGGUGAGAAACCCGUCCGCCGAUUGAUCAAGGGUUCCAGGGCCAGGUUUAUCCGCCCUGGGUUAGUCGGGACCUAAGGCGAGGCCGACAGGCGUAGUCGAUGGACAUCGGGUUGAUAUUCCCGAACCGAUCGUAGGAGGACCCAUACCGAGGCAGUCGAUGCUAACCACCCGAGCUUGCCCCAUGCCCUUCGGGGUGUGGAGGUUGGUGAGGCUGGGAACCAAGGUUGUAGUAGGUCAGCGCGUGGGAUGACGCAGAGAGGUAGCUUCCGCGGACUUAAUGGAAUAGUCCGUCUAAGCGUGCAGCCCGAUCCCGGGUAAUGCUGGGGUCUUUGGGUGAGACGUGAUGGGGAUCCCGUAUGGGCGUAGGUGAGUGAUCCUGUACUGCCUAGAAAAGUUCCGGCGUGACGAAUACGGUCGCCCGUACCCUAAACCGACUCAGGUGAUCAGGUAGAGAAUACCGAGGCGUUCGAGAGAAUCGUGGUUAAGGAACUCGGCAAAAUGCCCCCGUAACUUCGGGAGAAGGGGGGCCUUCGGGGUGAGAGCCCUGUGGGCCGCAGAGACCAGGGAGAAGCGACUGUUUACUAAAAACACAGGUCCGUGCGAAGUCGUAAGACGCUGUAUACGGACUGACGCCUGCCCGGUGCUGGAAGGUUAAGAGGACCGGUUAGAUGCCUUUGUGGUAUCGAAGCUGAGAAUUUAAGCCCCAGUAAACGGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAACGACUUCUCCACUGUCUCAACCGCGAACUCGGCGAAAUUGCAUUACGAGUAAAGAUGCUCGUUACGCGCAGCAGGACGGAAAGACCCCGGGACCUUUACUAUAGUUUGAUAUUGGUGUUCGGGACGGCUUGUGUAGGAUAGGUGGGAGACUGGGAAGCAUUCACGCCAGUGAGUGUGGAGUCAUUGUUGAAAUACCACUCUGGUCGUUCUGGAUUCCUAACCUCGGUCCGUGAUCCGGAUCAGGGACAGUGUCUGAUGGGUAGUUUAACUGGGGCGGUUGCCUCCUAAAGAGUAACGGAGGCGCUCAAAGGUUCCCUCAGCCUGGUUGGCAAUCAGGUGUUGAGUGUAAGUGCACAAGGGAGCUUGACUGCGAGACAGACAUGUCGGGCAGGUGCGAAAGCAGGAACUAGUGAUCCGGCACUCCAUUGUGGAAUGGGUGUCGCUCAACGGAUAAAAGGUACCCCGGGGAUAACAGGCUGAUCUUGCCCAAGAGCUCAUAUCGACGGCAUGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGGAGUUGGUCCCAAGGGUUAGGCUGUUCGCCUAUUAAAGCGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGCUGCGCGCGUUGGAUAUUUGAGAAGUCCUGUCCCUAGUACGAGAGGACCGGGAUGGACUGACCUCUGGUGUGCCAGUUGUUCUGCCAAGAGCAUGGCUGGUUGGCUACGUCGGGAAGGGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCCUGCUUCGAGAUGAGAUAUCCUUGCACCUUUUGGGUGUGUGAGACCCCCAGUAGAUGACUGGGUUGAUAGGCCAGAUGUGGAAGCGCAGUAAUGUGUGGAGCUGACUGGUACUAAUGGUCGAAGACUUACUUCAACAUUCU

    Taxonomic tree

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    This sequence is found in 0 other species

    1. Brachybacterium faecium DSM 4810 bacterial LSU rRNA
    2D structure New