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Tropicibacter phthalicicus 16S ribosomal RNA secondary structure diagram

Tropicibacter phthalicicus 16S ribosomal RNA URS00000455C7_1037362

Automated summary: This rRNA sequence is 1,422 nucleotides long and is found in Tropicibacter phthalicicus. Annotated by 4 databases (SILVA, ENA, Greengenes, RefSeq). Described in 4 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Tropicibacter phthalicicus 16S ribosomal RNA sequence is a product of rrn gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 1 R  IUPAC notation

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GAGUUUGAUCCUGGCUCAGAACGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAGCGCGACCUUCGGGUUGAGCGGCGGACGGGUUAGUAACGCGUGGGARCGUACCCAGAUCUAAGGAAUAGCCACUGGAAACGGUGAGUAAUACCUUAUACGCCCUUCGGGGGAAAGAUUUAUCGGAUUUGGAUCGGCCCGCGUUAGAUUAGGUAGUUGGUGCGGUAACGGCGCACCAAGCCUACGAUCUAUAGCUGGUUUUAGAGGAUGAUCAGCAACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUCUUGGACAAUGGGCGCAAGCCUGAUCCAGCCAUGCCGCGUGAGUGAUGAAGGCCUUAGGGUCGUAAAGCUCUUUCGCCAGAGAUGAUAAUGACAGUAUCUGGUAAAGAAACCCCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGGGUUAGCGUUGUUCGGAAUUACUGGGCGUAAAGCGCGCGUAGGCGGACCAGAAAGUUAGGGGUGAAAUCCCGGGGCUCAACCCCGGAACUGCCUCUAAAACUCCUGAUCUAGAGUUCGAGAGAGGUGAGUGGAAUUCCGAGUGUAGAGGUGAAAUUCGUAGAUAUUCGGAGGAACACCAGUGGCGAAGGCGGCUCACUGGCUCGAUACUGACGCUGAGGUGCGAAAGUGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACACCGUAAACGAUGAAUGCCAGUCGUCGGGUAGUAUACUAUUCGGUGACACACCUAACGGAUUAAGCAUUCCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGCAGAACCUUACCAACCCUUGACAUCCUGUGCUACAUCCAGAGAUGGAUGGUUCCCUUCGGGGACGCAGUGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUCGGUUAAGUCCGGCAACGAGCGCAACCCACAUCCUUAGUUGCCAGCAGUUCGGCUGGGCACUCUAGGGAAACUGCCCGUGAUAAGCGGGAGGAAGGUGUGGAUGACGUCAAGUCCUCAUGGCCCUUACGGGUUGGGCUACACACGUGCUACAAUGGCAGUGACAAUGGGUUAAUCCCCAAAAACUGUCUCAGUUCGGAUUGGGGUCUGCAACUCGACCCCAUGAAGUCGGAAUCGCUAGUAAUCGCGUAACAGCAUGACGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUUGGUUCUACCUGACGACGCUGCGCUAACCUUCGGGAGGCAGGCGGCCACGGUAGGAUCAGCGACUGGGGUGAAGUCGUAACAAGGUAGCC

    Taxonomic tree

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    2D structure New