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Desulfacinum infernum 16S ribosomal RNA secondary structure diagram

Desulfacinum infernum 16S ribosomal RNA URS00000194DB_35837

Automated summary: This rRNA sequence is 1,544 nucleotides long and is found in Desulfacinum infernum. Annotated by 3 databases (SILVA, ENA, RefSeq). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177).

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 18 N  IUPAC notation

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    AGAGUUUGAUCCUGGCUCAGAUUGAACGCUGGCGGCGUACCUAACACAUGCAAGUCGCACGAGAAAGGCUGGGUUUCGGCUUGGCCGAGUAAAGUGGCGCACGGGUGAGUAACGCGUGGGUGACCUACCCUCGAAUCUGGGAUAACCUCGCGAAAGCGGGGCUAAUACCGGAUACGUCCCUUCGGGGAGAAAGCCGGCCUCUCGAAGAAGCUGGUGUUCGAGGAUGGGCCCGCGUCCUAUCAGCUAGUUGGUAGGGUAACGGCCUACCAAGGCGACGACGGGUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGCACUGGAACACGGGCCAGACUCCUACGGGAGGCAGCAGUGAGGAAUUUUGCGCAAUGGGAGCAAUCCUGACGCAGCAACGCCGCGUGGGUGAAGAAGGCCUUCGGGUCGUAAAGCCCUGUCAGGAGGGAAGAACCUCGCUUGGGCGAAUAGCCUNGGCGACUGACGGUACCUCCAGAGGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCGAGCGUUAUUCGGAAUUACUGGGCGUAAAGCGCGUGUAGGCGGCAGNGCAAGUCUGGUGUGAAAGCCCGGGGCUCAACCCCGGAAGUGCAUUGGAAACUGCUCUGCUUGAGUACCGGAGAGGAAGGGGGAAUUCCCGGUGUAGNGGCGAUAUGCGUAGAUAUCGGGAGGAAUACCAGUGUCGAAGGCGCCCNUCUGUCANGGUUACUGACGCUGAGACGCGAAAGCGUGGGGAGCACACAGGAUUAGAUACCCUGGUAGUCCACNCCGUAAACGAUGGGCACUAGGUGUAGCGGGUAUUGACCCCUCCUGUGCCGAAGCUAACGCGUUAAGUGCCCCGCCUGGGGACUACGGCCGCAAGGCUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCUGGGCUUGACAUCCCGGGAAUCCUCUGGAAACAGGGGAGUGCCCUUCGGGGAACCCGGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCACCCCCUGCCUCUAGUUGNCAGCAUUUCGGGUGGNCACUCUAGAGGGACUGCCGGUGUCAAACCGGAGGAAGGUGGGGACGACGUCAAGUCCUCAUGGCCUUUAUGUCCAGGGCUACACACGUNCUACAAUGGGCGGCACAAAGGGCAGCGANCCUGCGAGGGGGAGGCACUCCCAAAAAGCCGNCCUCAGUUCGGAUCGGAGUCUGCAACUCGACUCCGGAAAGGUGGAAUCGCUAGUAAUCGCGGAUCAGCAUGCCGGGGUGNAUNCGUCCCCGGGCCUUGUACANAACGCCCAUCACACACGAAAGNCNGGUUGUACCAGAAGUGCGUGGGCUAACCCGUAUGGGAGGCAGCGUACCAAGGUAUGGUCGGUAAUUGGGGUGAAGUCGUAACAAGGUAGACGUAGGGGAACCUGCGNNUGGAUCACCUCCUA

    Taxonomic tree

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    2D structure