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Homo sapiens (human) long intergenic non-protein coding RNA 330 (LINC00330) URS0000CCE0A2_9606

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LINC00330: LINC00330 is a relatively underreported long non-coding RNA (lncRNA) that has the potential to be a diagnostic or prognostic biomarker [PMC6392549]. It is upregulated in tumor tissues and is one of the risk genes associated with a higher risk score in gastric cancer [PMC9004096]. LINC00330 is also upregulated in tumor tissues of bladder cancer and may play a role in the regulation of tumor progression through interactions with miRNAs such as miR-195 and miR-145 [PMC6392549]. In addition, LINC00330 is one of the key nodes involved in the origin and development of bladder cancer, as it has a higher node degree compared to other lncRNAs [PMC6392549]. However, LINC00330 does not show significant differential expression between esophageal squamous cell carcinoma (ESCC) tissues and normal esophageal tissues [PMC8312468]. It also does not have any functional annotations in UniProt and Gene Ontology databases [PMC7067725]. Overall, LINC00330 has been identified as an important lncRNA with potential diagnostic and prognostic value in gastric cancer and bladder cancer. However, its role in other cancers such as ESCC remains unclear.

Genome locations

Gene Ontology annotations

Sequence

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AAACAGUUGAGAACAGACUCCACCUUGUAGGACAGUGGCAUUUCUGAAAGUUCAGAACAAUUCCCCGAGCAACUUUACCUCACAAUCUCAUUGGAACGGCUGCAUCUGUGGGGCCCUGGGAGAGACUCAGCAGCAGACAGGGUCUCCAGAGCACACGACAAGAGGAAGAAUGCAUGAAGGUCCACCGGCAGUCGAAUCAGCCAAAGCACAAGACAAACACAAAGUCUUGCUCUGUCGCCCAGGCUGGAGUGCAGUGGUGCGACCUUGGCUCACUGGUUUGGGGCAUGUUCCUGGGUGUGUCUGUGAGGAGCAAGAAAGCCAGUUCAAGUCCCAAAACCUCAAAAGUAGGGAAGCCGACAGGGCAGCCUUAAGUCUGUGGCUGAAGGCCUGAGAGACCCUGGCAAAUCACUGAUAUAAGUCCAAAAGCUGAAGAACUUGGAAUCUGAUGUUGGAAUCUGAUCUUGGCCCAUCCUUGAAGAAUCUGGGGGUAAUAAAUACCCUGAACAUUGAUGAACCCAAAGGGAAGCCAGAAGGUCAGAUGUCAGCUGUCGGGAAGAAAGGCUGGAUAGGAAAUAGGAAAAAGCAGGGCAAACAAGGAGCUUCAAGGACUGAAACCCUUAAGAACCACUUGACUCUGUCUCUCACCACCUCCAGCCUUGAUGACACGGUGACAUAUAGAAGAACUGAUGCCCUUUGCUUUGAGCUGCACAAAAACCUGGCGCUGGACUUGGAGAAGCUGAAAGACAGGACCCGGCAGGAGCCUGAGGAGCUGCAGGCUGCUAGCCUGUAGACCACCGUGCUGUGUUAGCCACUGCAGCUGGGACCAUUCUGACACUCAGAGCCUGGAAAUGGCUGCUCCCUCCUGCCUGCUAUCCAAGUAUCCUGUGGAUACUUGGCUUUUCUCUUGUGGGCAACACUAACCUGAAACUCUUUGGGGAAGGGAAUUGAGGAAAUGUAGUUCCAAGAUUAGCCAAUUUAACUCAGCAUAAACCCAUCACAGGGUUUGACUACAGAGUUAUAACGUUAUUCUGUAGGCAAUGAAAACAGAAGUUUUUGAAAAAGGCAUCAAUUUGAUGAAAUUGAUAUUUUGGGGAAGAUUAAUCUUCUGCUGAGUAAAAUAUAACAGGUUGGAGGAAGAUGAAAAUGGAGAGAGUAGAGUGUAAUUAAAAGUUUGUUGGAGGCCGGGCACGGGAUUACGGCUCACUCCUGUAAUCCCAGCACUUUGGGAGGCUGAGGUGGGCGGAUCACCUGAGGUCAGGAGCUUGAGAUCAUCCCGGCCAACAUAGUGAAACCCUGUCUCUAAUAAAAAUACGAAAAAUUAGCUGGGCAUGGUGGCGCACACCUGUAAUCUCAGCUACUCGGGAGGCUGAGGCAGGAGAAUCCCUUGAACCCAGGAGGCAGAGGUUGCAAUGAGCCAAGAUGGUGUGAUUGCACUCCAGCCCAGGGGACAAUGUGAGACUCUGUCUCAAAAAAAAAAAAAAAUUUGUUGUAGUAGUCCAGGUGUCCGGGUGUUGUUACCAGGGCACCCAUGAUGAAAUAACUGGGAGAGUCCUUUUUUCUGACUGGUUUUCUUCAGUCCCUUUAUCUACAGGCACAACUGCUGAAGAAACCAGAUGGCCUGGGAUGGCACCAGAGCUUUUUUACCCUUGACCAGAUACUAGAGGGAAUUAAGACCCCACAAGUGGGCACGAACUGGAACUGGCGACCCCUAGUUGCCUUCAGAUCAUUAACACAUCAUUAUAAUGCUAAAAUUCCCUGCCAUUUUGUGAACAUGGGUUGCAUGAAGACGUAAGUUUAUGAAUUGCCUCUGCACACCUAGAGUCCCACCCUGUACAGGCUAACAUUCCUCCCUACAUGCACCCCCCCACAAACACACCCUGCCUCCCCCAGUCCUUAGAAACCCUAUGCCUGGCCGGGCGCAGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCUGAGGCGGGCGGAUCACUAGGUCAGGAGAUCGAGACCAUCCUGGCUAACACGGUGAAACCCUGUCUUUACUAAAAAUC

Taxonomic tree

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Publications