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Homo sapiens (human) long intergenic non-protein coding RNA 940 (LINC00940) URS000075EDAE_9606

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LINC00940: LINC00940 is a long non-coding RNA (lncRNA) that has been studied in various contexts. Triplexator predicts that the RNA segment of both AL157886.1 and LINC00940 may form triple helices within promoter regions [PMC9380742]. Among several lncRNAs, AC068025.2 (TAOK1), AL157886.1, and LINC00940 fulfill specific criteria [PMC9380742]. Previous studies have shown that pyrimidine-motif triple helices, like the ones in AC068025.2 and LINC00940, are unstable without C•G-C base triples [PMC9380742]. In FCS-stimulated ASMCs from patients with severe asthma, only two lncRNAs (LINC00940 and RP11-120D5.1) were the same as those seen in baseline ASMCs from patients with nonsevere asthma [PMC5338875]. Increased expression of RP3-503A6 and LINC00940, as well as decreased expression of RP11-453M23, AC009411, and CDRT7 were associated with improved prognoses [PMC6151882]. In high-risk groups, the expression levels of RP11-453M23, AC009411, and CDRT7 were significantly increased compared to the low-risk group; whereas the expression levels of RP3-503A6 and LINC00940 were significantly decreased [PMC6151882]. The AUC values for ROC curves for RP3-503A6, LINC00940, RP11-453M23, AC009411, and CDRT7 were 0.691 0.679 0.615 0.652 0.716 respectively [PMC6151882].

Genome locations

Gene Ontology annotations

Sequence

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ACAGACAGGCGCGUGGCCCCGCGCCAGCUAGCAGCCCAAGCUGUGCAGCCCAGGCUUCUGAGGGAGGCAGAAGAAAGAAAUCCAAGCCUCGGACAAGUUAACUAAGGGCACGGCAGGAAGGAGGUGUCGUCCUCAUCGCCAUGUGCACGUGUCAUCCGUCAGUGCUCCAUGCAGUGCUCCACCACGGCAUCCGCCACUCUGCCACCAGCUCCGCGGGGAUGGACGCACAGGCCCCAGUCAUGGCCCUGCCCUGAGGAGAUGCUGGUCGUCUUCCUGCUCAUUCACUCCCCUGUGCUGCACUGCUGGGGUCAGACAAGGCUCCAUCCAAGAACCCAUGACUUCAAAAGAAAGAAACCUUUGUCCUCAAAUUUGGUAACAGGCAAACGGUCUGCGUGGAAGCCCUGUCUGCAGCCUCUGCUCACUCCAGGACGUGCUGCCCUCACUGCUCCUCUGAUGUGCCCCCGGCUCAAGGCUGAGCAUUCCCGUAUCCACGCAGGAAGGCCGGGGGACUGGCUCCCAAACAGCGGCCAGGACCUUGGGGGCACCCAGGGAGACUGGGGCCCUGCACCUCAGGGCUUUGGAUCCAGGUCUGGGACGAGCCCUGGGAAUCAGCAUGGGAGCAGUGGCAGCCAUCCUGUGGCCCUGAGGGGAGCUGGCUGGAGGACAACCUGAAAUGCUGAGGGCAGCAGGAGGAAACACAGAAGGAACCUGCGUCCUGGGUGACAUCCCGGACCUGCUGCACUCGCCGGCCCUGGAGCCACCUGCCUCUGGCUUCAUGUGAGCUGUCACACUGUUAUUAUUAUUUCGUUCCUCAAGUAGGGGUUUCCUGCUCCUUGCAGCCGGAAGCAGUAAGUGGUAGCCACCCCACCCCUGCAGGGCAGUCUUCUGAUGGCUCUGAGCUCCCUGAGGUGGGGGCGAGGCAGGGUCUGUGCUCCACUCUGAGGGCCCAGUGGAGCAGCAGGUGUUCGAACACAUAGGGUUUACCCCAGGCAGAAACCACCCUCAUAAGGGCAUGAGACCCAGGCAGAGUGAGCUCUCUGGCCUCUUGGUAUUUUCUUUUGUGUCUGUCUUCUCAGCAGCCUAUGAGCUCCUCCAGGGCAAAAAACUGCCAUCAUGCUAAGGGGUUCUGGACCCUGGGGCCAGGCACAGGGCCAGGGACAGAGUGGGCAGGUAACGAAGGCUUGCUGGGCACCGUGGGAGAGAAGGGAACGGAGGCAUUGAGGGGCAAGAGAAAAGGAGAAGUGGAAGGCCAGACAGGCAGAGAAGGAAAGGUUCGUGGAGAGCAGUCUCUUCAUGGGGACCCAAGGAGGCCCCACCAGAGAGGAACUGAGGCUGUGAAAUGGAAGGAUGGAGGCCUGAGGGAUCCAGGCCAGUGGACAAGUGAGCCCGAGCAGACGGAACCAUCCCCAUGCCUAUCUGGUUGUCUCCUCCUCCUCCUGCUCCUCACCCCCUUCCUCCUCCUCCACCUCCUCCUUCUCCCCCUCCUCCUCCUUCUCCCCCUCUUCCUCCUCGCCCUCUCCCUCCCCCUCUUCUUCCUCCUCCUCCCUCUCUUCCUCCUCCUCCCCCUCUUCCUCCCCCUCUUCAUCCCACUCUUCCUCCUCCCCUCUUCCUCCCCCUCUUCCUCCUCCUCCCCCUCUUACUCCUCCCCUUCUUCUUCCCCCUCUUCCUCCUCCCCUCUUCCUCCUCCUCCUCCUCCCCCUUCCUUCUCCUCCUCUUCUUCCUCCUCCUUCCCCUUCCUCCUCCUCCUCCCCCUCUUCUUCCUCCUUCUCCUAUCCUCUUUUUCUUCCUCAACCUUUUCCUCCUCCUCCUCCUCCUCCUUCCCCGCCUUACCCCUCCUUCCCCACACUCUGAAAUGAGCACAUGGCUCAGACUGAGAGGACAAACCUCCAGCUGAAUUUAGUUGUAGCUGUGGUUCCCCAAAAUGCUUUGAGGAUUCAUCAGAACCAGUAGCUGCCUCUCUGCUUCCUCAUCUACACACCUAAUUUUGUAGCUUCAGAACAGGUGUGACUCAGGCAGAGGAAGGGCUACACAGGUGUCACUGUGCCCACCCCUAGGGAGACUGCUACAGACAGACUUCCCGGUGGGACCCGGCCCCCACCCAUGCAUGGUGGCCACGGGCAUGAGGAGGGUGAUAAUGACAAGGGGAGCCACGAUGACCACAGGGUUUAUAGAGAUCUCGCCAUUUGCUGAGCAAUGUGGAGGAACGUUACACACACCAUGUCGCCUCCCCCGAUGCCUGCAGGGCAGGUAUCAUUGCCCUGCAUUCUAUUGAGGAGGAAAUUGAGUUGGAAGUGCCCAAGAUCACGUCGUUAAUAAAUGGCAGGGCCUAAACAAGCCCUUAGCCGCUACAAC

Taxonomic tree

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Publications