v24

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Homo sapiens (human) SNAI3 antisense RNA 1 (SNAI3-AS1) URS000075EA24_9606

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SNAI3-AS1: Our signature consisted of eight protective pyroptosis-related lncRNAs (INHBA-AS1, TMEM254-AS1, LINC00663, MIR497HG, SNAI3-AS1, CHL1-AS2, GDNF-AS1, and LINC01088) and seven unfavorable lncRNAs (HOTAIRM1, CRNDE, LINC00665, KDM4A-AS1, LINC00092, and COX10-AS1) [PMC9587675]. The top associated SNP for the second locus, rs140142658 (P = 9.6x10−9), lies within the first intron of the antisense RNA gene SNAI3-AS1 [PMC5437638]. We examined SNAI3-AS1 and PEG10 expression by qRT-PCR in 46 pairs of HCC and matched adjacent normal tissues [PMC7442791]. References: [PMC9587675] - Liang, H., Liang, L., Dongqin Quan & Zeng Zeng et al. (2020). Identification of a long non-coding RNA signature for predicting prognosis and biomarkers in hepatocellular carcinoma. Journal of Hepatology. [PMC5437638] - Jiang, D. K., Sun, J., Cao, G., Liu, Y., Lin, D. C., Gao, Y. Z., ... & Liu, J. Y. (2017). Genetic variants in five novel loci including CFB and CD40 predispose to chronic hepatitis B. Hepatology, 66(5), 1417-1429. [PMC7442791] - Zhang L et al. Identification of an immune-related lncRNA signature to predict survival in patients with hepatocellular carcinoma Journal for ImmunoTherapy of Cancer 2020;8:e000340

Genome locations

Gene Ontology annotations

Sequence

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CGGCGAUCCGGGGUCUGGGCGCGGCGAGGUCUGGUGUGGCAGAUGUGGAUAGCUGGACCCUCCUGGGUGCCUCUGCGUUAUGUCGUUUGGUUGAUGCAUUUGGAGAGAAUCUGUGCUCUCCACAACUGCAGGGGCAACAUGCUUUCCUGGCCUCUUCAGAUCAGGGUGGCUGUUCUUGGGUGCUGCACCAAAACUCCAGCAGUGGGCUUUCUUCAAGUGGCCGGCUCACCUCAUUCCUGCCAAGACCCAGGUCCGUGUUCUCACAGUGCUGCCAUCUUUCCUCCGUGUGAGCGUGGGCUGUGCGGAGAGUGGACCUCGGUGUGUGCGGGGCUGCGUGCACUGCCAUCGCUCCCUCUACACGAGCCGGCGUGGACCCAGGGCUGAGCUGUGACCACGAGGGCCAUCCCGACGAGCCGCCAUGGACCCAGGGCUGAGCUGUGACCAUGAGGGCUAUCCCGACGAGCUGCCGUGGACCCAGGGCUGAGCCGUGACCAUGAGGGCCAUCCCGAAACUGUGAUUGUUUUCUGAAUGUGGAAGCGUCGGCCGAGCGCGGUCCUUGGAGAACCCUUGCUGCGGAGAAUGACGCUCACUCUGCGGCCUGGCCUCGCCUCCCCAUCCCUUCUGCAAACUCACAGGACAGGAUUGAUGGGGAGAGCCCAGGCGAAACGAAGCUGACCCUAGUGACCAGCCCUACUGGCGGCUCUGGAACAGGCCCGGGACCGGUGGCCUGGAGACAGUGGUCCUUUCUGGAUGGGCUGCAGUCUCCGAAGGCUUCCCCCACUGGAGUCAGCCCUUUAGGAGUUUGUCCAGUGCCUCCAGAAAGCUGUUUUUUGGGGGACGGAGGACUUGGCCUGGAAUUCUGGAAUUCCCAGGGGGUCAGACAUGGUUAUGGGAAGUUUAAUAAAACCGGUGAAUCACGUGAAAAAAAAAAAAAAAAAAAAA

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Publications