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Homo sapiens (human) GARS1 divergent transcript (GARS1-DT) URS000075D6DC_9606

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GARS1-DT: GARS1-DT, a long non-coding RNA (lncRNA), has been identified as a risk factor in clear cell renal cell carcinoma (ccRCC) patients [PMC9741795]. It has a negative correlation with overall survival (OS) in ccRCC patients, suggesting its potential as a prognostic marker [PMC9741795]. A study constructed a risk score formula that included GARS1-DT expression values, along with other lncRNAs, to predict patient outcomes [PMC9741795]. Furthermore, in another study using Venn diagrams, GARS1-DT was found to be downregulated in two cell lines [PMC8255921].

Genome locations

Gene Ontology annotations

Sequence

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CAAACUGCCACCGGAACUGCUUUAAAAAUGUUUGGUUCACAGCCUUCACUGGAUUACCUAUUGGAGCAAACAAAGUGUAACCAUGUAAAACCUGUGAGCUUGUAUUGAUAUCUCAUGGCUAGAGUUCCAAGCGAAUGGGUCUCAUGAGAUCUGAUGGUUUUGAAAAUGGGAGUUGCCCUGCACAAGCUCUCCUUUUGCCUGCUGCCAUCCACAUAAGAUGUGAUUUGCUCUUCCUUGCCUUCCACCAUGAUUGUGAGGCCUUCCCAGCAUGUGGAAAUUUGCAGGAAUUUAGCCAAUUCAGAGGUCUUGUUCUCCAUAAUUUGGAAUUUUCCUUCGGAUUUGAUCAAGUUGGAUAGAGUUGGUCAAACCCAAUGGGAAAAAGAUGAAAACAACAAGAAACAGAAACAAACAGCAACAACAACAACAACAAAAACAAUGCAUUUAAUUAAAUGAAGAUGAGCUCAUGCUGGAGUAGGGUGGACUCUGAACCCAGUGGGACAAGCGUCCUUAUUAAGAAGAGGGAAAUCUGGACACACACAGAGCAGAGACCGCCGUGUGAAGAUGGAGGCAGAGAUCGGAGAGAUGCUGCCACACGCCACAAAUGCCUGGGGCUCCCAGAAACUACACGGAGCCUCCCCCAGCGGCUUCAGCAGGAGCAUGGCUCGGCCAACACUUUGAUCUUGGUCUUCCAGCCUCCAGAACGUUUUCCUAAAAUUCCCUUUUCCACUGGUGUGUGGUGCAAGAUGAGGCACAUUUUCCAUGGAUGGUGAACAGAGGGAGGAGCCUUUUGAUCACAACCAGGUCACCCCACUUCUAAGCCACUGUGCCUCCAGCCCCACAAGACUAAGGAGAGAGAGCGCAGCGUGGUGGAGAGUGAGCUGUGCUGGGACCAUUGUUUCCGUAACCUCGUUUUCUGUGUCCAGCUGACACACCUUCAAAGUGGCAUCAGGUCCUAAACUGUAGCUUGCAAUGUGCCUGUUUCCAGAAACCAAGGUGAAAGUGCUUUUAGACAGUGUUCCCAUGCAAGAGUCCCUUCCCAGCUUUUUUCUGGAAAUGCAUGUUUCUCUGAACUCUGAGUCCCAAGAAAAAUCACUUGAGACACCAAGAAAAUGGGGGAAGUGCUAAAAUUGUGUGGGAAUUCAAGCUUAACAAUAAACAUCAAGACAUUUUUGAUAAAAAUGAAUCCACUGACAUCGGGGAGGAGCAAGAGAACAGCACGCUGACACUGGGUCAGAGGCUAAGACCGACAUUUCUGGGAACCACUCCCGGAAGGGCACAGAGGAGACGCUUUCAGCCUCUCAUCAGCCAGCCUGGCCUGUAGCUGCUGCACGUUAUGAGUGUGUUCCUGGCAUGACUGCUUCUAACAGCGACCAUUUCAUUAAGUUUUUAAGUGCCUGGUAAUUGCUUGGUUAUGACCGGUGUCUGCUCCAUGGCAGCCUCUUCCUGAAGAAAUGCUGAGGCAGUGUCACGCUGGUGUCUGUCCUCCUUACAGAAUGCCUGAACAGUUCCAUUGACUCAAAGUGAAGAUCAAAAGAACCAAAUGACAGCAAUAGCCAAGUGUAAUCAUCAGUAACCCUGUGUUCUAUCCACAGGUAAAAAACAAUCAUCCUCUUCAUUAUGGGUUUCAAUUUUAAAUGUAAUACAUUUUUAGAAAUGCCUAUUUCCUUUUAUAAUCUCUUUAUAUAAUCUAGGUUAUUCUGGCUCUUAGGUCUUCAUUUAGCUACUGAAAAGAUUUGAUCUCAAAUCAAUGAUCUAACCACCCAUGACCAUCUCCCACCUCUCUCCCCGUACACCCCCCAGCAUGAAUUCUGGGAACUCAGGUAAAAUGCUUUCUGGAAACCUGCCUGUAUUAGUCUGUUGUCAAGCUGCUAAUAAACACAUACCCGAAACUGGGUAGUUUAUAAAGGAAAGAGGUUUCCUUUAUAGUUCCACAUGGCUUGGGAGGCCUCACAAUCAUGGUGGAAGGCGAAUGAGAAGCAAAGUCACAUCUUGCAUGGCAGCAGGGAAGAGAGAGUUUGUGUAGGGGAACACCCCUUUAAAAAACCAUCAGAUCUUGUGACACUCAUUCACUGUCACGAGAACAGCACGGGAAAGACCCGCCCCCAUGAUUCAAUUACCUCCCAUGACACAAGGGAAGUAUAGGAGCUACAAUUCACAAUGAGAUCUGGGUGGGGACACAGACAAACCAUGUCACCGCCUAAAACCAACUCAAUAGUCUAAGGAAUUUGACUGGGGAGAAUCUGGAGAGGAUUUAAUUAAUUUGGCAAAAGGAUUAGCAAUUGAAUCUAAGUGAGAAAAGAGAAUUCUUGGAGGAAAAAAAGAUGUUUAGUUACACUGAGAAAUUAAAACCUGAAGUAAUUGCCUUUGAGAUUUUUUUCAGGAAAUGAGUAUUGAUUGCCUACUGUGUGUCAAAUUAUGUGUUUCAUGUCAAAGACUCCAAAGUAGAUAAGAUAUAGGCCCAGCCUUGGGGAGCUCAUUGAGUCACAGAGAAAGUUUGAAUGUUUCAGAGGAAUCAUCAAGAACAGGGGAUCAGCAAUCUAUUAUAUUUUAAUUGCGUCUUUUCAUGAUUAUAAAAGCAAUGCAUGCGUGCUGAAGAGAAUUUGGAAAAACAAAGAAGAAAUUAAAAAUCGUCUCUGAUCCUGCCACCAGAAAUAACCACUGUUAGCAAUUGUAUCACUUCUGUAGGUCUACAUGGUUAUCAUAAUAAGCUCUAGUAUUGAUUACAUGCAUCUCAUGUACCAGAGAUUAUGCUAGACUCUCAUUUAAUCUGUACAUUAGCCCUAUGAAGUAGGGACCAUCAUUCUCCUCAUUUUACAGAUGAGGAAACAGAGGCUUGGAGAGGUUACUCUGCCUAAAGUCUCAUAGCUAGCGAGUGGCAGAGAUUGGACUCACCCAAGCUUUGUCUUAUUCUCAAGCUCUCAACCAACCCGGUGGUGAGAAGAGCCAGCAGCAAAGCCUGUCAUCUUUGUCUUCUUUUUUUUUCUAACCUCAAAUCAGGGAGAAAAUGCCCUUUGUCAUUAGAAGGGCAAGGCAAUUCUGAAGACAGCCCAGUUGGCUUGUCUCCGAUUUGGCUUUCAGGGGCCUGUCUGAUACCUAUGGAGAGACGAGGGCUGAACAAGCUGUACUCUCAAAACAAAACAAAGCAAAACAAAACUUUAGUCUCUUUAGGGACUCUCUGAUAGUAAUGCAGAGGGAGAAAGGCUUUCUUUGUCUCACUGGGAGGAAGGUUCCCUACGGAAAUUGAAGGCAGUGCCUGUUGACAUAGCGCUGCCACCUGGUGGAAAUAAUGGUGUAGGACAUCAUGUCCAGCACCACUAGCGCUGAGACACUCCCUGGGAAGAGAAAUGUUUGGAGAGAAAUUUGCAAGAAGUUGGAAGUCUCGCAGUAGCAGGUAGGAACAAGAAUUAUAACUGCUACUGUGACCCCCUAAGGCUCCUCACAUCCUCUUAAGGCUUGGAGAAACUCACACUAUGUAUAUUUUCCUGUAUUUUUGAAAAAUGUUUUCCUUUAUGCUUUGUUGUAAUGAAAUUACCUCUGAUGGUCACAUACCUUAAAUAUUUAGUAUAUAUAUGAAUACUAAAUGUCCAUUUUCAGGAGUUAGUUUACCUGCAUCUAAAAUCAGGAAUAGGUCACAGAGUAACUGAGCAAAAAGUGCUGUUAGGUUUGUGCAUUUCACCCUUUGCCUGGGAUGAGAGGACCUCAAUCAUCUUGGUACUAAUGACAGGAAAAGUGCCCUCCUAUCCAUGUGUAUCGGCUACGUGACUCAAGUCUCCUUAUUUCCUUUUCUAGCAUAACAAGGGGUUGUUACUGUUGUUUUACAUCUGUGUUAAUGAGAUAAAUAAGUUUAAAAUAAAAAGAUGUGUACCAGGCA

Taxonomic tree

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Publications