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Homo sapiens (human) microRNA hsa-mir-30c precursor (hsa-mir-30c-1) secondary structure diagram

Homo sapiens (human) microRNA hsa-mir-30c precursor (hsa-mir-30c-1) URS000075D43C_9606

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MIR30C1: MIR30C1 is a gene that interacts with several protein-coding genes, miRNAs, lncRNAs, and rRNAs [PMC9730017]. Two SNPs (GOLGA7 rs11337, MIR30C1 rs16827546) were excluded due to low minor allele frequency (MAF) [PMC5313634]. Frequent amplifications were observed in MIR30C1 and MIR30C2 genes, which encode the same mature miRNA, hsa-mir-30c [PMC4129468]. MIR30C1 on 1p34.2 had a high rate of loss in samples with a miR-30c cluster deletion [PMC5400605]. The same deletion was observed in MIR30C2 on 6q13 [PMC5400605]. The clones used for the study were RP11-2B6 for MIRLET7A1 (9q22.32), RP11-453C14 for MIRLET7A2 (11q24.1), CTD-2504J8 for MIRLET7A3 (22q13.31), RP11-170L4 for MIR30C1 (1p34.2), and RP11-756H9 for MIR30C2 (6q13) [PMC5400605]. These findings were obtained from a previous study that used array Comparative Genomic Hybridization to investigate the expression of let-7a and miR-30c genes in specific genomic locations [PMC5356719]. References: [PMC9730017] [PMC5313634] [PMC4129468] [PMC5400605] [PMC5356719]

Genome locations

Gene Ontology annotations

Sequence

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ACCAUGCUGUAGUGUGUGUAAACAUCCUACACUCUCAGCUGUGAGCUCAAGGUGGCUGGGAGAGGGUUGUUUACUCCUUCUGCCAUGGA

Taxonomic tree

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This sequence is found in 31 other species

  1. Aotus nancymaae (Ma's night monkey) miRNA (ENSANAG00000005871.1)
  2. Callithrix jacchus (white-tufted-ear marmoset) miRNA (ENSCJAG00000025962.3)
  3. Cebus imitator (Panamanian white-faced capuchin) microRNA 30c-1 (ENSCCAG00000007833.1)
  4. Cercocebus atys miRNA (ENSCATG00000021903.1)
  5. Choloepus hoffmanni (Hoffmann's two-fingered sloth) microRNA 30c-1 (ENSCHOG00000015442.1)
  6. Colobus angolensis palliatus miRNA (ENSCANG00000016262.1)
  7. Dasypus novemcinctus (nine-banded armadillo) microRNA 30c-1 (ENSDNOG00000047698.1)
  8. Equus asinus asinus microRNA 30c-1 (ENSEASG00005001058.1)
  9. Equus asinus (ass) microRNA 30c-1 (ENSEASG00005001058.2)
  10. Equus caballus (horse) microRNA eca-mir-30c precursor
  11. Gorilla gorilla gorilla microRNA 30c-1 (ENSGGOG00000031846.2)
  12. Loxodonta africana (African savanna elephant) microRNA 30c-1 (ENSLAFG00000023467.1)
  13. Macaca fascicularis microRNA 30c-1 (ENSMFAG00000017252.2)
  14. Macaca mulatta microRNA mml-mir-30c precursor (mml-mir-30c-1)
  15. Macaca nemestrina (Pig-tailed macaque) miRNA (ENSMNEG00000006234.1)
  16. Mandrillus leucophaeus (Drill) miRNA (ENSMLEG00000019593.1)
  17. Microcebus murinus (gray mouse lemur) microRNA 30c-1 (ENSMICG00000017952.3)
  18. Nomascus leucogenys (Northern white-cheeked gibbon) microRNA 30c-1 (ENSNLEG00000025204.2)
  19. Otolemur garnettii (small-eared galago) miRNA (ENSOGAG00000018100.1)
  20. Pan paniscus (bonobo) microRNA 30c-1 (ENSPPAG00000018473.1)
  21. Pan troglodytes ptr-mir-30c-1 (ENSPTRG00000027608.2)
  22. Papio anubis miRNA (ENSPANG00000006717.3)
  23. Piliocolobus tephrosceles (Ugandan red Colobus) microRNA 30c-1 (ENSPTEG00000030204.1)
  24. Pongo abelii microRNA 30c-1 (ENSPPYG00000021726.2)
  25. Pongo pygmaeus (Bornean orangutan) microRNA ppy-mir-30c precursor (ppy-mir-30c-1)
  26. Prolemur simus microRNA 30c-1 (ENSPSMG00000016668.1)
  27. Propithecus coquereli (Coquerel's sifaka) miRNA (ENSPCOG00000009632.1)
  28. Pteropus vampyrus (large flying fox) microRNA 30c-1 (ENSPVAG00000026652.1)
  29. Rhinopithecus bieti miRNA (ENSRBIG00000014022.1)
  30. Rhinopithecus roxellana microRNA 30c-1 (ENSRROG00000008673.1)
  31. Saimiri boliviensis boliviensis (Bolivian squirrel monkey) miRNA (ENSSBOG00000000999.1)
  32. Theropithecus gelada (gelada) microRNA 30c-1 (ENSTGEG00000024326.1)
2D structure Publications