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Bos taurus (cattle) microRNA bta-mir-196b precursor URS000075AEB7_9913

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bta-mir-196b: Bta-mir-196b is a microRNA that has been found to be under-expressed in cattle, specifically in Wagyu cattle compared to Holstein cattle. This suggests that bta-mir-196b may play a role in regulating fat deposition in beef through the stimulation of adipocyte differentiation via the PPAR pathway, similar to miR-519d [PMC5341059]. Bta-mir-196b, along with bta-miR-874, directly regulates the expression of PPARα and RXRα, two important transcription factors in the PPAR signaling pathway [PMC5341059]. These microRNAs may also regulate lipid metabolism, glycerophospholipid metabolism, adipocyte differentiation, and glucose metabolism by inhibiting the expression of various genes involved in the PPAR pathway [PMC5341059]. Additionally, bta-mir-196b has been implicated in endothelial cell proliferation and bta-miR-146b has been associated with bacteria recognition and regulation of inflammatory response during Mycobacterium avium subspecies paratuberculosis infection [PMC6162677]. Overall, bta-mir-196b appears to be involved in various biological processes related to fat deposition and metabolic regulation.

Genome locations

Gene Ontology annotations

Sequence

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AACUGGUCGGUGAUUUAGGUAGUUUCCUGUUGUUGGGAUCCACCUUUCUCUCGACAGCACGACACUGCCUUCAUUACUUCAGUUG

Taxonomic tree

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This sequence is found in 69 other species

  1. Ailuropoda melanoleuca microRNA 196b (ENSAMEG00000022271.2)
  2. Balaenoptera musculus microRNA 196b (ENSBMSG00010013358.1)
  3. Bos grunniens miRNA (ENSBGRG00000002061.1, ENSBGRG00000002064.1)
  4. Bos indicus x Bos taurus miRNA (ENSBIXG00000019190.1, ENSBIXG00005015289.1)
  5. Bos mutus (wild yak) miRNA (ENSBMUG00000002550.1)
  6. Callithrix jacchus (white-tufted-ear marmoset) cja-mir-196b (ENSCJAG00000029102.4)
  7. Camelus dromedarius (Arabian camel) microRNA 196b (ENSCDRG00005001083.1)
  8. Canis lupus dingo microRNA 196b (ENSCAFG00020003607.1)
  9. Canis lupus familiaris miRNA (ENSCAFG00000020607.2, ENSCAFG00030005702.1, ENSCAFG00040009892.1, ENSCAFG00845016110.1)
  10. Capra hircus microRNA chi-mir-196b precursor
  11. Castor canadensis (American beaver) miRNA (ENSCCNG00000023520.1)
  12. Catagonus wagneri (Chacoan peccary) microRNA 196b (ENSCWAG00000000025.1)
  13. Cavia porcellus microRNA 196b (ENSCPOG00000024386.2)
  14. Cervus hanglu yarkandensis microRNA 196b (ENSCHYG00000007823.1)
  15. Chinchilla lanigera (Long-tailed chinchilla) miRNA (ENSCLAG00000021196.1)
  16. Chlorocebus sabaeus (African green monkey) microRNA 196b (ENSCSAG00000020647.1)
  17. Cricetulus griseus (Chinese hamster) microRNA mir-196b (ENSCGRG00000021636.1, ENSCGRG00001003702.1, ENSCGRG00015021083.2)
  18. Dasypus novemcinctus (nine-banded armadillo) miRNA (ENSDNOG00000026258.1)
  19. Delphinapterus leucas microRNA 196b (ENSDLEG00000009320.1)
  20. Echinops telfairi (small Madagascar hedgehog) miRNA (ENSETEG00000020451.1)
  21. Erinaceus europaeus (western European hedgehog) miRNA (ENSEEUG00000016147.1)
  22. Felis catus (domestic cat) microRNA 196b (ENSFCAG00000024306.4)
  23. Fukomys damarensis (Damara mole rat) miRNA (ENSFDAG00000004495.1)
  24. Heterocephalus glaber (naked mole-rat) miRNA (ENSHGLG00000022473.1, ENSHGLG00100023459.1)
  25. Ictidomys tridecemlineatus miRNA (ENSSTOG00000016818.1)
  26. Jaculus jaculus miRNA (ENSJJAG00000006408.1)
  27. Lynx canadensis (Canada lynx) microRNA 196b (ENSLCNG00005009566.1)
  28. Macaca fascicularis microRNA 196b (ENSMFAG00000013812.2)
  29. Macaca mulatta microRNA 196b (ENSMMUG00000032930.3)
  30. Marmota marmota marmota microRNA 196b (ENSMMMG00000006555.1)
  31. Mesocricetus auratus (Golden Hamster) miRNA (ENSMAUG00000002489.1)
  32. Microtus ochrogaster (vole) microRNA 196b (ENSMOCG00000005226.1)
  33. Monodon monoceros (narwhal) microRNA 196b (ENSMMNG00015006298.1)
  34. Moschus moschiferus (Siberian musk deer) microRNA 196b (ENSMMSG00000008716.1)
  35. Mus caroli microRNA 196b (MGP_CAROLIEiJ_G0008026.1)
  36. Mus musculus microRNA mmu-mir-196b precursor
  37. Mus pahari microRNA 196b (MGP_PahariEiJ_G0007139.1)
  38. Mus spicilegus (steppe mouse) microRNA 196b (ENSMSIG00000009824.1)
  39. Mus spretus (algerian mouse) microRNA 196b (MGP_SPRETEiJ_G0008430.1)
  40. Mustela putorius furo (Domestic ferret) miRNA (ENSMPUG00000021748.1)
  41. Myotis lucifugus miRNA (ENSMLUG00000017822.1)
  42. Nannospalax galili miRNA (ENSNGAG00000001686.1)
  43. Neogale vison miRNA (ENSNVIG00000012118.1)
  44. Ochotona princeps miRNA (ENSOPRG00000017540.1, ENSOPRG00000018432.1)
  45. Octodon degus miRNA (ENSODEG00000022375.1)
  46. Oryctolagus cuniculus (rabbit) microRNA 196b (ENSOCUG00000024166.1)
  47. Otolemur garnettii (small-eared galago) miRNA (ENSOGAG00000032040.1)
  48. Ovis aries (sheep) microRNA 196b (ENSOARG00020000193.2)
  49. Panthera leo (lion) microRNA 196b (ENSPLOG00000007549.1)
  50. Papio anubis miRNA (ENSPANG00000003239.3)
  51. Peromyscus maniculatus bairdii (Northern American deer mouse) microRNA 196b (ENSPEMG00000002493.2)
  52. Phocoena sinus microRNA 196b (ENSPSNG00000014286.1)
  53. Physeter catodon (sperm whale) microRNA 196b (ENSPCTG00005000334.1)
  54. Piliocolobus tephrosceles (Ugandan red Colobus) miRNA (ENSPTEG00000021441.1)
  55. Pongo abelii miRNA (ENSPPYG00000022012.2)
  56. Prolemur simus miRNA (ENSPSMG00000014708.1)
  57. Pteropus vampyrus (large flying fox) miRNA (ENSPVAG00000024493.1)
  58. Rattus norvegicus (Norway rat) microRNA rno-mir-196b precursor (rno-mir-196b-1, rno-mir-196b-2)
  59. Rhinolophus ferrumequinum (greater horseshoe bat) microRNA 196b (ENSRFEG00010007208.1)
  60. Sciurus vulgaris (Eurasian red squirrel) microRNA 196b (ENSSVLG00005012232.1)
  61. Suricata suricatta microRNA 196b (ENSSSUG00005019775.1)
  62. Sus scrofa (pig) ssc-mir-196b-1 (multiple genes)
  63. Theropithecus gelada (gelada) microRNA 196b (ENSTGEG00000020873.1)
  64. Tursiops truncatus (bottlenosed dolphin) miRNA (ENSTTRG00000022551.1)
  65. Urocitellus parryii miRNA (ENSUPAG00010017382.1)
  66. Ursus americanus miRNA (ENSUAMG00000014246.1)
  67. Ursus thibetanus thibetanus (Asiatic black bear) microRNA 196b (ENSUTTG00000006601.1)
  68. Vicugna pacos (alpaca) miRNA (ENSVPAG00000015600.1)
  69. Vulpes vulpes miRNA (ENSVVUG00000024789.1)
  70. Zalophus californianus (california sea lion) miRNA (ENSZCAG00015007020.1)
Publications