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Homo sapiens (human) long intergenic non-protein coding RNA 623 (LINC00623) URS000075A782_9606

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LINC00623: LINC00623 is a long non-coding RNA (lncRNA) that has been identified as a potential biomarker for several types of cancer, including pancreatic ductal adenocarcinoma (PDAC), prostate adenocarcinoma (PRAD), breast invasive carcinoma (BRCA), and kidney renal clear cell carcinoma (KIRC) [PMC7557915]. To establish the specificity of LINC00623 as a marker for PDAC, it is necessary to assess its levels in larger noncancer cohorts and patients with other pancreatic diseases [PMC9387035]. The subcellular localization of LINC00623 has been determined, and it has been found to affect the ubiquitination levels of NAT10, a protein involved in PDAC tumorigenicity [PMC9387035]. Knockdown of LINC00623 leads to reduced protein levels of HRAS, p-ERK1/2, and Collagen II, while inhibition of miR-101 increases these protein levels. Conversely, knockdown of LINC00623 increases the protein levels of MMP13 and cleaved-Caspase3/7 [PMC7066905]. These findings suggest that LINC00623 may play a role in chondrocyte senescence through HRAS-related pathways [PMC7066905]. Overall, further research is needed to fully understand the molecular mechanisms underlying the oncogenic activity of LINC00623 in different types of cancer.

Genome locations

Gene Ontology annotations

Sequence

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ACCCAGGAUCACUUCCGAAACCACUUGGCCUUCAGCCCCUGCCUCGGCCAGAGGUUUCAUUUUUAACUGAAUAUUUACGAAAGCUGAAAGCGUGCGAGGGGGGUGGGGUGGAAAUAGCGGCUGCUUCUUUUCCAAGGAUUUAUUUAAUGGGGAUGUGUUCAAGGCAAGACCGAAUUCAGAAGGAUAUCGACGUCGUGAUCCAGAAGUCCAGAGCUGAGGACUGCCUGUUUGCAGGGCCCGCCUGGCAGGACGACUGAGCAAGUUCUUGGAAAACCAGAGAUAUUAGAGCGGUGAAUCGCGCUGGUCACGUUGGACACCUGCGCGUUAGGAGAUUCUGGAGCCAGAGGGAGAGACCCCAGAAACGCCCCGGUCGGCGACCCAGCCCGAGACGCCUGGGGUCCCAAGGGAAGCUGAACGCCCGGUGGGCUCCCGGGAUGGUUCUUCCGGUUCUUUGUGCCGCCUUCACCCAGUGAAGGAGCCUGUAUCCACCCUGCCCAGUCGCUGUUGGGCUGCUGCGGAGCUUCCGCUGCCAUCUUCGGAUCCUGUGUUCCGCCCGGGGCUCCACCAGGGCAGGGAUGGUGGUGAGGGUCGCUCGUGGGUCCCCUGGCAGGGAGCAGGGUCUGGCACUCACAAGGGCGCACGACUAGGACUUGUCGAAUGAAUCCCUUGUCGCCUUUAGCUUUUAGUCCUUUGAAGAGAGGUGAGAGUGGAAAUCAAGAGAUUUUUUUCCACGGGGAAGUUCUUUUUACAAAGCGUUGAUUUCUUGGCACCCCGCGGGGCGGGCAACUGACACGACCUCCGGUGCACCUUCUGCGCUGUGGAGCCUCUGGGGCUCAGCUGGGCGGUGGUCGGGUCGUGGGGCGGUAGGGCGGGAGCGGGGGAAGGGAAAGCAAAAGCUGGAAAAGAAGCAGGGGAGUUGUGAACCAGACAUCCAGACCUCCUGAAGGGCUCGUGCAGACGUACAGGCGGGAUCUUCUGGAAGUGAGAAUUGUUUUUGUUUGUUUAUCUAUUGUAGCAGAAUGGGGAAAUGGAGAGAGAACCUGAAAGAGCCCCAAACUCGAGGACCUAUUGCUCCCCAAGAAUAACAUCUUCCAGAACUAGACAGAAAACUAGGCGUCUGGGAACCCUGAAAUCCUUGGAGGAGUAGAUCAUCAUGACCCUCUGUGUUCCUUUUGGCAAAUGACUUGCUUCCAUUGUUUGUUUGUUCAAUUGUCUGUUUGUUAAAUAAAUAAAACCCUUUUUAUGUAUCUUUAAAAUUACAUUGGUUCUAUUAUUUUAUGAUUACAAACGAUGCUGCAGUCAUCAUUCUUGUACACUUCUCAUUGGCCACUGGUGUAUUUCUAUAGGGUGGAGGCCUGGAGAGCAGUUGUUCCAGCAUAGUGUUUACAUAGCUUUUAUUUAAUUCCGUUUUCUUUCCUUUGUUGCUUUAUUAGCUAUAACCCUUCUCUUAUUUCAGUGGCAGCUUUAGGGUUUCUGGGAUACAUCUUUAAUUUAUCACAUUCUGCUUUCAAGUGUAAUUAUACCUCCCUUUCUGGCCUUUAUCCUAGUGUUACGUAUUUUUACUUUAUGCAUUAUAAGUUUUGUGAUUAUCAUUACCUUCAUUUAUUAUGUCAAAUAUUUUUAAAAAGAUUUAAAUUAUAAGAAAAUGUGUAGUACAUGCUUUCUAAAUGCCAUUUCCAAUAUUUGUUUUUGUAUAGGUCCAGAUUUUUAUCUGGGAUCCUUUUGCUUCUGCCUGGAGGACUCUUAAGAUUUCUUGUAGCGUGGGUUGGUGAAUUCUUUUAGUUUUUGUAUGUUUUUCAAUGUCCUUAUUUCACUCACAGUUUUGAAAUUUUAUUUUUGCAUAGAAUUCUAGGUUAAUUUUUUUCUCUAGUACUUUAAAAAUGUUGCCAUUUAUGAAGCAUUGCCAUUUAAAGUAUCAUCUUUCAUGUGCUUGUGAAAAUGGCAUAAAGCCGGUUUCUUGUGCUGGUUAUGUAAUUUUCAGAAUGUGUAUUUAAAUUUAAAAUAUUAAAUUUUCCUAAAAAACUAAAAAUAUUAAUCAUGAAUGUCCUAGAUUCAUCUUAAAUUCCACCAACAGUGCACUUAAAAUGUGCCCAACCUGAGGGUCAAACCUACCUGCUGACAUGUAAUUUGUGUUUGUGAGACAUUCUCAACAGCAUUUGCUUUCCCCAGCUGAGUGAUCUUCCUCACAUCUGAAUGUCUUCAGUGCAAAAGGAAAUGUUUUUCUUCGCAAAAAUACUUUCAAAUACUCUUACUUCAAGGAAGUGCAUUAAAAACAAACUUCUCAUUUGCAUCCCUGGAAUUCAAAGCCCUAAUCAAGUGCUUCAGGAUCAAGAGCUAAACAGGGGAGGACAAAGCGUGGCUUCUUCACUAGGAGUCAAGCCAAAGUCAACUGGUUUGAUCGCCAACGUAGAUCGGAACUCGGUUCACCAGCGACCUGAGGACCCGGCCCAGAAGAGGGAGUGUCUCUUCAUGGUGCCUUCAGAUAGAAAAUCUCCUAGGAUUUCUUUCUUUCCCUUUGAUCUACUUCCAACUCUCCCUUUCUAUUUCUUCAAGACCUUUUUCGGAUCCCUACUGCGAAGGACCUAAGGGGCCGGUGCCCUUCCCCACUGGUCCCUCCCUGCCUGGUGUCUUAGGAGCCCAAGCUCACCUGGAACAUUACUGCCCGCCGGAGACAGCGAGAGGACCAAGGAGCGCGGCGGUGCGGUGGGAACCACAGCGUCACCGCUCACCUGCGCCUCGUGGGCUCCUAGAAAAUUGAAUAAAUGCCCCCUGAAGCUUCUCUGCAGGUCACACGGAAGAGGAGGGUGGCUGCCGACACGCGGGAGAAGCUUCAAGAAGCGUCGGGAGGACCUACCUGGUCCUGCCCCUGGGCCUUGAAGACAGGCCUGGCCAGGCUGAUUUGGUCCGGUAGUCUCAAAGAAAAUGUUCAAGGGUGGCCCAAACCUCCACCCCAAGAUUAAGGCUCUUAAAUGUCUGACGGUUUUGAGACUCGUCAGUAGAAUCAAUCCCGCCUGUAUCAGGAGACUCCUUUGCCAAAAUUCAAAGACCAAGAAAGAGAAAGAUUGGGCAGGUUAAAGUCUGUAAUUAACCAAACAGGAGACAGAAUUUUUCUGAGAAAUUGUAUGUGUGCUGUGAGAAAAAGACUAGCCUCAAGGAGAAUCUGUUCUUUUGGCUUAAUUGUAGGAAAGAAUGGAAUUGCCACCAACAAUGGUACGUUGAAACGGCAGGUGCAUCAGGCUGUAGAUGUGAAGGAAUUAAAAAUAUUUUACCCCAAAAUACAUUUCUUUGACAUAUUUUGAGAUGUCUGUUCAGAAAGCCAGCUGCAGAAGUAGCCCUGCAAAGUUGUCUUUCGUUGGGGAGAUUUGCAUCUGUAGGGAAUCUGCAUUGAUGCAGCCAAGUCUUUCCUUGCCCAGAUCUAGGAAAGAUUAACUGAGAGUCUGACAGCUGUAAAGGUCUGAAAGAAACUUUCAGAGCUUAUUCUUUCUGAGAGCUGCUGCCUGUAAGGUUUCAUUUACAUAUUAAGAUCACCUUUGCUAGCCAGGCCUCCUCUUCUCUCCCUCCCAUAACCUGUCUUGCCCACAAUAAAUGGAUAUACCUCUGACUCUAA

Taxonomic tree

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Publications