Homo sapiens (human) CAPN10 divergent transcript (CAPN10-DT)

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Homo sapiens (human) CAPN10 divergent transcript (CAPN10-DT) URS0000759CED_9606

3,567 nucleotides
6 databases (GeneCards, HGNC, LncBook, LNCipedia, MalaCards, RefSeq)
Found in 0 other species
11 publications
1. lncRNA
2. antisense lncRNA

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CAPN10-DT: CAPN10-DT is a long non-coding RNA (lncRNA) that has been identified in several studies. In one study, it was found to be downregulated in comparison to normal tissues, along with other lncRNAs such as AC004846.1, SNHG26, AC027682.6, and AC023157.2 [PMC8789477]. Another study explored the prognostic relevance of lncRNAs and found that CAPN10-DT was one of the differentially expressed lncRNAs associated with prognosis in colorectal cancer patients [PMC9509522]. Although CAPN10-DT has not been extensively studied, it has been shown to have intimate links with pyroptosis-related genes [PMC9509522]. Furthermore, a risk model for predicting prognosis in colorectal cancer patients included CAPN10-DT as one of the lncRNAs [PMC9558288]. In hepatocellular carcinoma cell lines, CAPN10-DT was found to be upregulated compared to normal liver cell lines [PMC10031146]. Overall, while there is limited research specifically on CAPN10-DT compared to other lncRNAs, it has shown potential relevance in colorectal cancer prognosis and hepatocellular carcinoma cell lines.

Genome locations

Gene Ontology annotations

Sequence

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GCUCUGCUGCGGAGGCCGUGGCCGCGGGUAGUUGGGAGGAACCGAGAUUUACGCUUGGUAAGGCAAGUUGCGAGCUGUCCGGCGCCGGUCGAGUUCCUGCCGCCGUCGUCGUCAGGCAGGGGAGAAGGGGGCCUCAACCCCUCUAGUGACAGCUGUUUGCUACCUAAUAGGGCUUUUCAUCCCACCGGGCCCCAGGGCCUUCGUUAGGAGCCCAGCAGGCUCAACUUCUUGCUGUGGUUCUGGAAAAGGGAGUGACCACCUGGCUCAACACCUCUCUCUGUGAUGUGUUUGGGAGUUUUGGGAAAUGAGACGGCUCCGAGGGAAGAGCUUGAGGGAGCGGCGUCGCACUCGUUCGACCUUCCCGGGCCUGGGCUUUGUUUCUAGGCAUUUUAGGUUGAACGCUCUACAUCUUAACUGGGGGCAGGGGAGGUGGCCAGAGCAUCCCGCUGAGCGUUUUCCGAUUCCCCAGAUGGCCAGGCACCUGGUCCUGGUGGCUGGACAGUGACCCCGUGGACGCACAUUUACAGCUAUAGCCAUUCAGUGCCGCGGGGAGGUGAGGAUAGUGAUCCUGGGACCUGCUCGAGGAUUCACCCUUGCCCCAAGAACCUGUUCCAUUCCCAGGAAUGAAGGCGGUCAGGCAGGGGAGGAGAAGGGGGCCUCAACUCUUCUAGUGACAGCAGUUUGCCACCUAAUAGAGCUUUUCAGAUUUUGCCUCCUCAGGCCAUUUUACUCAGCCUCGGACUAUCAAGGAUGGUCACAUUGAAGCUGUUUUUCUGCAGUCAGGAGCGAAAAGUCCCGGCUGUUGAAGGAGAAACUGAAUCUGGUUCAGGAGUCCCAGGUUCCUCCCUCUGAGAGGCCAGGUGGGGCCUGCGUGAGUAGCAGUUGUUCAGGUGGCAGGACACUGCUGUUUUCAUCCCACCUGGCCCCAGGCCCCUGAUUAGGGGCCCAGAGUGCUUAUGUACUUGCCUCGGUCUGAGAAAGGGAGUGACUGCAUAGCCCAACACCUGUGGGAUGCCUCACUGCCCAGAUGUUUCAUCUCCGGGAUGCUUCAUUGCCCAUUCAGCACCCUCUAUGGUGCUGACUCUUCCGGAAGAUGUUUCUGAUUCCUUGCUAGGCUGGUGGUUGCACCAUAGCUGAGAGGACUCAAGAAGAGCCUGGUCUCAGCUUCACCUAGGAGUCCCGGAGGAGUAAGAAACACGUAUCUUUCCUGUUCUGGGCACAUAUGGGUGGGUAGCAGAGCUGAGGCUAGCUGAGGAUCCCGACUCUCCUUUGGGAGCCUUUGUUGUGCCGCUCUCCCAGGCUGAUCAGAUCUGGAGAGCUAACAGCUUCCUGUGGCCACAUCUGUGUCCAAGGCUGGGCCCAUGCCUGUAGCCAGAUUGCCAGGAUCUGGAAGGGGCCAAGAGACAGCUGGUGCUGGGUAGGCAGCAGCCCUGUGUCAACCUGCCCCCACUAUUACCCCAUGCUGUGAUUUGCAUGUGGUCUGCCCCUGCCCAAAAUGGUAUUGAAAUUUGAGCCUCAAUGAGGCAGUGUUAGGAGGUGGUGCCUAGUAGGAGGAGUUUGGGUAAUAGGGGUGGAUCCCUCAUGGAUAGGUUAGUGUCCUUUGUGGAGGGGUGAGUUCCCAUGAGAGCUGGUUAGAGAGUCAGCCUUCCUGCGGUUGUCUCUUGCUUCCUCUCUCGCCAUAUGGCCACGUAAUCUCUUUGUGCAUGCCUCUCCCCUUCUACUUGCUGCCUUGAGUUGAAGUAGCAUGAGGCCCUCACCAGGUGCAGCUGCCCAAUCUUGAAAUUUCCACCAGAAUUUUGAGCCAAAUAAACCUGUUUUGCUUUUUUAAAAAAAUAAAUUCCCCCACCUUGGCUGGGCGCAGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCGGGCGGAUCACGAGGUCAGAUCGAGACCAUCUUGGCUAACACGGUGAAACCCCAUCUCUACUGAAAAAAAAAAAGAAACAAAAAAAUUAGCCAGGUGUGGUGGCGGGCACCUGUAGUCCCAGCCCCUCACUCGGGAGGCUGAUUGAGGCAGGAGAAUGGUGUGAACCCGGGAGGCGGAGCUUGCAGUGAGCCCAGAUCGCACCACUGCACUCCAGCCUGGGCGACAGAGCGAGACUCCGUCUCUAAAUAAAUAAAUAAAUAAAUAAAACAAACCCAACCUCAGGUAUAGCAGUGUGAAACAGACUAAGACAUUCCACAUGCCCUGUGGUCCCAUCUGCUACCCCAGGGUGCAAAGAUGUUCCCUCAGCCCUGAAGAAUGACAUUCCCCCCGGCUCCUGGGAUAUCUGGAGGGGUUGUAAGCAGCUUGGGUUGGUGAGAUAAGGAGUUUGGGGGGCAGCUGAUUCAUGACCCUGGCCUCCUCAACUGCAGGCUCUUGGUCUGAAGUACUGUAAUUAAAGUAUGAGAGCCUCGGGGCCCUCACUUCAAGGAGGGAAGAGCAUCCCCAUGCCUCAGCGUUUGGGGAUUGUAGGGAGAUGAGAGUCCUUCAGGUGGGACUAGUUCCCGCCAUGACCCCACUGCUGGCCAGUGGCCUGAAACGCAUCUGACCACUUCUCAGGUUCAUGGGUGUUGAGGAGGAGCCCUGUGGAAUCAACCCUGUCUGCCUCCUCUUAUCCUGCCACUCCUCUUGCUCUGUCUGGAUGACUGCCCUUGUUUUUCAAGGGAAUGUUCCCUGUCUUCCUCAGCCAGGAUUUUUUCUGAACUUGACAUCUCCGUUUGUUCAGGGGGCAAUCAUUGGGCACUUCACUGUGCUGGUCCUUGCAUUCUCAUGGAGAUGCAGAGAUUAAAAAUUAGUAUCUUGUCCACAUACUGCCCAGAGUUAGCAAGGAUUGCUUUUCUGUGGAUUUGUCUCAGGUCGGGCACAGUGGGGGUAGGGUCCUUCUCGAACCUUUUCCUAGCCUAAAGGUUCCAGCUGAAUCUUCCCAGGCAGGGCUGAAACAGGAACCAUUUUAGGCUUUGCUGCAACCCAUGGUCAGUUCUCCAAGAAAAGUGAAGAGGGUUCCACCUGGGGCAGCCCUCAAGGGCUCAGAGGGCCAAAACACACGUACAACAUGUUGAGACACUGAGUUUGUGCGAUCCCCACACAUCUCAGCAGUGAGUAUUUCUGCCUCAUUUUACCGAUGAGGAACCUGAGCUUCAAAGGGAAGAGGUGACAGCUCAGGACCACACAGCUGUAGGUAGGAGGCAGGAAAAUAGGGUCUGAGUGCAGGGAACAUAGGCUGAUUCACACUUCAGUUAUGAUAGGAAAUACCUUCUCCAUAGGACAUAGGCCAAGCAAAUGACUUUGUAACUUCAUCCUCUCCAUCUGCAUAACGUGUGCCCCAAGUAACCAAUGGAAUCACCUAGAGGGUGUUUAAACUCUCAGAAGUUCUGUAACAGGCUCUCCAUCUACAUAACGUGUGCCCCAAGUAACCAAUGGAAUCACCUAGAGGGUAUUUAAACUCUCUGAAGUUCUGUAACAGGGCUUUUGUGCUCCUAUGCUCAGGCUCACCCCCACACUGUGGAGUGUACUUUCAUUUUCAAUAAAUCCCUUCAUUCCUUCUUUGC

Taxonomic tree

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Publications