Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Homo sapiens (human) KRTAP5-1/KRTAP5-2 antisense RNA 1 (KRTAP5-AS1) URS00005C6188_9606

Caution, this is an AI generated summary based on literature. This may have errors, see here for more. Please share your feedback with us.

KRTAP5-AS1: KRTAP5-AS1 is a long non-coding RNA (lncRNA) that has been studied in various contexts. In a study, the expression of KRTAP5-AS1 was found to be positively correlated with the m7Gscore, along with other lncRNAs such as LINC02804, ZDHHC20-IT1, MSC-AS1, PVT1, PCAT7, and CASC19 [PMC9168541]. In another study comparing PTC and normal tissues, KRTAP5-AS1 expression was significantly higher in PTC [PMC6183593]. KRTAP5-AS1 has also been identified as one of the lncRNAs playing crucial roles in cancer progression [PMC6900565]. Furthermore, an eight-lncRNA signature that included KRTAP5-AS1 was identified as an independent prognostic biomarker for HBV-positive HCC patients [PMC7180394]. Although not associated with PCa (prostate cancer), KRTAP5-AS1 has been shown to act as a miRNA sponge for miRNAs such as mir-596 and target CLDN4 in other contexts [PMC8314517]. The function of KRTAP5-AS1 is still unknown in DM (diabetes mellitus) and AD (Alzheimer's disease) [PMC9451601]. Additionally, it has been suggested that KRTAP5-AS1 could play a role in regulating Claudin-4 in gastric cancer patients' prognosis [PMC6183593]. References: [PMC9168541] - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168541/ [PMC6183593] - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6183593/ [PMC8314517] - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8314517/ [PMC6900565] - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6900565/ [PMC7180394] - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7180394/ [PMC9451601] - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9451601/

Targeting miRNAs 9 total

According to LncBase, this RNA is targeted by the following miRNAs:

Genome locations

Gene Ontology annotations

Sequence

Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

Search for similar sequences
AGACCCAGGCGCGGCGUUUUACCUGCAGCGGCUGUGCUCGCCCCGCCGCGACCCCCGCAGGACGGAGCCGGAUCCCCCUGCACUCGGGCGGACCUGGGACCCUCAGAGGCGAGCCGGCUGCCUCGGGUCACACAUCCGCGAACUCCGGGGGCGGGCUCCCCAGGACGCCGCCGACCCCCCACGACCCCCAGCCCUCCCGCUUCCGUGGAAAGCCGCCCCGACGACCCCUGUGCGGGCUGUUGAGGGGCCGCACCCCGCCGACCGCUGUGGGAACACCUCCGCGCGUGCGGCGGGGACGCGGCGAGUCCGGGGCAGGAAGAACGCACGGAUGGAGACAACAGGAAGGAAAGAGACCUUCCUGGUCACACUUGGGCCACAGGAGAACAGGCAGCGGCCCAGGAGGAUCCAGGGUCCUGAUGGUGGUUGAGAAGCUGGUUCUUAGUGAUCACUCAGAAACGUCGGCCUGGCCUUGUGGGGUCAGACCUUGCAUCUCAGUCAGCCCAGGGAGAAGAAGAAGAUGGUCCACACCCAAGUGCAGGGAACAUCGUGGCAGUCGGCUGGGUGCCUGCGUCCAGGCGAGGACACCUCCCGCAUCAGGGAAACACACGUUUCUGGAGUGAGGAGGCUGAAGGCAGGGCCCAGAGGAGAGCUGAGCCAUGGAAGGAGGUGUGUGCAUGGAUGGUGAGCUAGAGCAGGUGCAGGUGCCUCAGGGAGGAUGUGUGGGACGAACUGACUCAGGGAACCAUAAGAAAUGCUUUCACCAAACAGGAGAAACCUGAAGGUCUGGGUCCAGAGCCUCAGAUCUUACACUGGCAGCACACAGGGACACAACAGUUGGACUGGCAGCAACAGGGCUUGCAGCAGCUGGACUGGCAGCACACGGGGACACAGCAGCUGGACUGGCAGCAGCAGGGCUUGCAGCAGCUGGACUGGCAGCAGGAUGAUCCACAGCCUGAGGAGCAGCAACAGGGCUUACAACAGCUGGACUGGGAGCAGCCACAAGAACCACAGCCCCCCUUGGAACCCCCACAGGAGCCACAGCCCCCCUUGGAGCCCCCACAGGAGCCACAGCCCCCCUUGGAGCCCCCACAGGAGCCACAGCUGGUGCAGGAACAGGCUGGCACCCAGGAGCACACGGGCUUGCAGCAGCAGACAGGCACAUAACAUCUGGAGCCACAUCCCCCACAGCUGGAGCUGCAGCCCCCACAGCCAGAGCCACAGCCCCCACGGCCGGAGCCACAGCCCCCACAGCCAGAGCCACAACCCCCACAGCUGGAGCCACAGCCCCCACAGCCGGAGCCACAGCCUCUGGAGCAGCCACAGCAGCCCAUGGUUCUGGUGGAUUGAGGGUGGAGCAGGUAGAGGAGCAGGUGAGAGGGAGGUGCAGGUGUGGAGCUCCCUGAGCCUGGGCUCUUUAUAUACCUGUCCAGAUGUCAGGCAUGACACAGGGUCCCUUUCUUGUGACUGUUUACACUAUUUUUCCAGAGCUCUAUUUUUUUCCUCUUUGCUAGUGACUUCCUUCUGGCUCAGUUGAGCAUCUACUUUCUUUGUUUUCUAAAUUUGUCUUUUUCCCCAUUUGUUUUGGCCCCUACAAUUAAAACCUCAGCUCCAGGCUGUCUGGUUCUUCCUGCAAAGCUCCAGGGUGCUGGUCACCUGCUCUCUGCUGACCACAUGUGACCAAUGGGCAACAGCCUCUGCCCACGUGCUCUCAUCUUUCCUGUGUUGACUCCCUCAAUAAUAUUAAUUUUACAUUUUUAGAUUUCAAAAUUAUCCACGAUCUUUAUACUCAUGCCAGUCUCAGCUUUCCGGGUGUGUUAGACCAUUCUUUGCAUUGCUCUAAAGAAAUACUUGAGGCUGGGUAAUUUAUAAAGGAAAGAGGUUAGAAUGGCUCAUGGUUCUGCAGGCUGCACAAGCAUGGCACCCACCUCUGCUCAGCUUCUGGGGAGGCCCUCAGGGAGUUUUCCUCACGGUGGAAGGCGAAGCAGGAACAGGCACACCACAUGGUGAGAGUGGGAGCAAGGGGUGAGGAGGAGCCACACACUUGUGAACAACCAGAUCUGAGUGAACACACUCAUCGCCAAGGGGGUGGCACUAAGUCACUCAUGAGGGAUCCACCCCCAUGACCCAGACACCUCCCUGCAGGCCCCUCCUUCAACACUGGCCAACAACUAUAUGAAAAAAUGCUCCACAUCACUAACUAUUCGGGGAAUGUAAAUCGAAACCACCACGAGAUACCAUCUCAUAUCAGUCAGAAUGGCUUUUGAU

Taxonomic tree

View annotations in different species by clicking on species names.

Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

Publications