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Danio rerio (zebrafish) dre-miR-29a URS0000272A3D_7955

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dre-mir-29a: Dre-mir-29a is a miRNA that has been shown to have age-dependent expression in previous studies [PMC5584509]. In experiments with zebrafish embryos, dre-mir-29a mimic was microinjected to investigate its regulation of Ireb2 mRNA [PMC5304403]. The 3'-UTRs of Ireb2 from zebrafish and N. furzeri were isolated and fused with the eGFP coding sequence to generate a reporter construct, which was then co-injected with dre-mir-29a mimic into zebrafish embryos [PMC5304403]. Dre-mir-29a was found to be one of the up-regulated miRNAs that potentially target down-regulated genes in a gene regulatory network [PMC4169864]. Additionally, dre-miR-22a-3p, dre-miR-16a, dre-miR-181a-3p, and dre-mir-29a were validated using qPCR in a study using RNA-seq data [PMC6684945]. Interestingly, the 10th cytosine of Pm-miR-29a was found to be replaced by uracil, similar to that in dre-mir-29a from Danio rerio and cte-miR-29a from Capitella teleta [PMC4691125]. Overall, these studies provide insights into the expression and regulatory roles of dre-mir-29a in various biological contexts.

Genome locations

Gene Ontology annotations

Sequence

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UAGCACCAUUUGAAAUCGGUUA

Taxonomic tree

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This sequence is found in 54 other species

  1. Alligator mississippiensis ami-miR-29a-3p
  2. Anolis carolinensis Aca-Mir-29-P2b_3p (mature (guide))
  3. Artibeus jamaicensis aja-miR-29c
  4. Bos taurus bta-miR-29c
  5. Callorhinchus milii (elephant shark) Cmi-Mir-29-P2b_3p (mature (guide))
  6. Canis lupus familiaris (dog) cfa-miR-29c
  7. Cavia porcellus cpo-miR-29c-3p
  8. Chiloscyllium plagiosum microRNA cpl-miR-29a
  9. Chrysemys picta bellii Cpi-Mir-29-P2b_3p (mature (guide))
  10. Chrysemys picta (Painted turtle) cpi-miR-29a-3p
  11. Columba livia (rock pigeon) cli-miR-29a-3p
  12. Cyprinus carpio ccr-miR-29a
  13. Dasypus novemcinctus (nine-banded armadillo) dno-miR-29c-3p
  14. Echinops telfairi Ete-Mir-29-P2d_3p (mature (guide))
  15. Eptatretus burgeri Ebu-Mir-29-P2f_3p (mature (guide))
  16. Equus caballus eca-miR-29c
  17. Gadus morhua gmo-miR-29a-3p
  18. Gallus gallus Gga-Mir-29-P2b_3p (mature (guide))
  19. Gekko japonicus Gja-Mir-29-P2b_3p (mature (guide))
  20. Gorilla gorilla gorilla ggo-miR-29c (MIR29C)
  21. Gorilla gorilla ggo-miR-29c
  22. Haplochromis burtoni (Burton's mouthbrooder) abu-miR-29a
  23. Homo sapiens hsa-miR-29c-3p
  24. Latimeria chalumnae Lch-Mir-29-P2b_3p (mature (guide))
  25. Lepisosteus oculatus (spotted gar) Loc-Mir-29-P2d-v1_3p (mature (guide))
  26. Macaca mulatta (Rhesus monkey) mml-miR-29c-3p
  27. Maylandia zebra (zebra mbuna) mze-miR-29a
  28. Microcaecilia unicolor Mun-Mir-29-P2b_3p (mature (guide))
  29. Monodelphis domestica Mdo-Mir-29-P2b_3p (mature (guide))
  30. Monopterus albus (swamp eel) Mal-Mir-29-P2b1-v1_3p (mature (guide))
  31. Mus musculus (house mouse) mmu-miR-29c-3p
  32. Neolamprologus brichardi (lyretail cichlid) nbr-miR-29a
  33. Nomascus leucogenys (northern white-cheeked gibbon) nle-miR-29c
  34. Ophiophagus hannah (king cobra) oha-miR-29a-3p
  35. Oreochromis niloticus (Nile tilapia) oni-miR-29a
  36. Ornithorhynchus anatinus (platypus) Oan-Mir-29-P2b_3p (mature (guide))
  37. Oryctolagus cuniculus ocu-miR-29c-3p
  38. Pan troglodytes ptr-miR-29c
  39. Pongo pygmaeus (Bornean orangutan) ppy-miR-29c
  40. Pteropus alecto pal-miR-29c-3p
  41. Pundamilia nyererei pny-miR-29a
  42. Python bivittatus Pbv-Mir-29-P2b_3p (mature (co-guide))
  43. Rattus norvegicus rno-miR-29c-3p
  44. Salmo salar (Atlantic salmon) ssa-miR-29b-3p
  45. Sarcophilus harrisii (Tasmanian devil) Sha-Mir-29-P2b_3p (mature (guide))
  46. Scyliorhinus torazame Sto-Mir-29-P2b_3p (mature (guide))
  47. Sphenodon punctatus Spt-Mir-29-P2b_3p (mature (guide))
  48. Sus scrofa ssc-miR-29c
  49. Taeniopygia guttata Tgu-Mir-29-P2b_3p (mature (guide))
  50. Takifugu rubripes fru-miR-29a
  51. Tetraodon nigroviridis tni-miR-29a
  52. Tor tambroides (Thai mahseer) miR-29a
  53. Xenopus laevis (African clawed frog) xla-miR-29c-3p
  54. Xenopus tropicalis Xtr-Mir-29-P2b_3p (mature (guide))
Publications