URS00000ABFE9

  • 1542 nucleotides
  • 8 databases (CRW, ENA, Greengenes, Modomics, PDBe, RDP, Rfam, SILVA)
  • Found in 92 species

Species-specific IDs

Description Databases
Escherichia coli O10 16S ribosomal RNA ENA
Escherichia coli O157 16S ribosomal RNA ENA
Generic rRNA -
Escherichia coli O121 16S ribosomal RNA ENA
16S ribosomal RNA from Escherichia coli str. K-12 substr. MDS42 (PDB 4WOI, chain DA) ENA, PDBe, RDP, SILVA
Escherichia coli ER2796 bacterial SSU rRNA ENA, SILVA
Escherichia coli O145:H28 str. RM12581 bacterial SSU rRNA ENA, SILVA
Escherichia coli O145:H28 str. RM13514 bacterial SSU rRNA ENA, SILVA
Staphylococcus aureus 16S ribosomal RNA ENA
Escherichia coli LY180 16S ribosomal RNA RDP
synthetic Escherichia coli C321.deltaA bacterial SSU rRNA ENA, SILVA
Escherichia coli str. K-12 substr. MC4100 bacterial SSU rRNA ENA, SILVA
Escherichia coli IS25 SSU rRNA ENA, SILVA
Escherichia coli O15:H18 16S ribosomal RNA ENA
Escherichia coli O39:H21 16S ribosomal RNA ENA
Escherichia coli O16:H48 16S ribosomal RNA ENA
Escherichia coli O18ac:H14 16S ribosomal RNA ENA
Escherichia coli O100:H21 16S ribosomal RNA ENA
Escherichia coli O89m:H10 16S ribosomal RNA ENA
Escherichia coli O89m:H9 16S ribosomal RNA ENA
Escherichia coli O158:H23 16S ribosomal RNA ENA
Escherichia sp. TC-EC600-tetX4 16S ribosomal RNA ENA
Escherichia sp. TM-G17TGC 16S ribosomal RNA ENA
Escherichia coli O141:H4 16S ribosomal RNA ENA
Pseudomonas aeruginosa 16S ribosomal RNA ENA
Escherichia coli O113:H4 16S ribosomal RNA ENA
Escherichia coli B12:H39 16S ribosomal RNA ENA
Escherichia coli O4:H2 16S ribosomal RNA ENA
Escherichia coli O6:H10 16S ribosomal RNA ENA
Escherichia coli O17or77:H18 16S ribosomal RNA ENA
Escherichia coli O18:H14 16S ribosomal RNA ENA
Escherichia coli O28/42:H37 16S ribosomal RNA ENA
Escherichia coli O79:H4 16S ribosomal RNA ENA
Escherichia coli O83:H32 16S ribosomal RNA ENA
Escherichia coli O87:H39 16S ribosomal RNA ENA
Escherichia coli O93:H19 16S ribosomal RNA ENA
Escherichia coli O93:H21 16S ribosomal RNA ENA
Escherichia coli O149:H2 16S ribosomal RNA ENA
Escherichia coli O175:H26 16S ribosomal RNA ENA
Escherichia coli O178:H7 16S ribosomal RNA ENA
Escherichia coli O187:H52 16S ribosomal RNA ENA
Escherichia coli OX25:H28 16S ribosomal RNA ENA
Escherichia coli str. K-12 substr. DH10B bacterial SSU rRNA ENA, RDP, SILVA
Escherichia coli ETEC H10407 bacterial SSU rRNA ENA, RDP, SILVA
Escherichia coli str. K-12 substr. W3110 bacterial SSU rRNA ENA, RDP, SILVA
Escherichia coli 53638 bacterial SSU rRNA ENA, SILVA
Escherichia coli O103:H2 16S ribosomal RNA ENA
Escherichia coli SE11 bacterial SSU rRNA ENA, RDP, SILVA
Escherichia coli O157:H7 str. EC4206 bacterial SSU rRNA ENA, SILVA
Escherichia coli O157:H7 str. EC4045 bacterial SSU rRNA ENA, SILVA
Escherichia coli O157:H7 str. EC4042 bacterial SSU rRNA ENA, SILVA
Escherichia coli O157:H7 str. EC4115 bacterial SSU rRNA ENA, RDP, SILVA
Escherichia coli O157:H7 str. EC4196 bacterial SSU rRNA ENA, SILVA
Escherichia coli ATCC 8739 16S ribosomal RNA RDP
16S ribosomal RNA from Escherichia coli str. K-12 substr. MG1655 (PDB 7OE1, chain A) ENA, PDBe, RDP, SILVA
16S ribosomal RNA from Escherichia coli DH1 (PDB 4V6K, chain BA) ENA, PDBe, RDP, SILVA
Cloning vector pRNA8 bacterial SSU rRNA ENA, SILVA
Escherichia coli O157:H7 str. TW14359 bacterial SSU rRNA ENA, RDP, SILVA
Generic rRNA -
16S ribosomal RNA from Escherichia coli (PDB 3J9Z, chain SA) CRW, ENA, Modomics, PDBe, Rfam, SILVA
Escherichia fergusonii partial 16S ribosomal RNA ENA
Escherichia coli W 16S ribosomal RNA RDP
Escherichia coli UMN026 bacterial SSU rRNA ENA, RDP, SILVA
Escherichia coli KO11FL 16S ribosomal RNA RDP
Escherichia coli BW2952 bacterial SSU rRNA ENA, RDP, SILVA
Shigella boydii 16S ribosomal RNA ENA
Shigella dysenteriae bacterial SSU rRNA ENA, Greengenes, SILVA
Generic rRNA -
Generic rRNA -
Generic rRNA -
16S ribosomal RNA from Escherichia coli BW25113 (PDB 7OE0, chain A) ENA, PDBe, SILVA
Generic rRNA -
Generic rRNA -
Generic rRNA -
Generic rRNA -
uncultured bacterium SSU rRNA ENA, SILVA
Clonorchis sinensis Bacterial small subunit ribosomal RNA Rfam
16S rRNA (body domain of 30S subunit) from Escherichia coli K-12 (PDB 7BOD, chain A) ENA, PDBe, Rfam, SILVA
Escherichia coli O157:H7 16S ribosomal RNA ENA
Escherichia coli 97.0246 bacterial SSU rRNA ENA, SILVA
Escherichia coli 5.0588 bacterial SSU rRNA ENA, SILVA
Escherichia coli 2.3916 bacterial SSU rRNA ENA, SILVA
Escherichia coli 2.4168 bacterial SSU rRNA ENA, SILVA
Escherichia coli 3.2303 bacterial SSU rRNA ENA, SILVA
Escherichia coli B41 bacterial SSU rRNA ENA, SILVA
Escherichia coli 900105 (10e) bacterial SSU rRNA ENA, SILVA
Escherichia coli O157:H16 16S ribosomal RNA ENA
Escherichia coli VR50 bacterial SSU rRNA ENA, SILVA
Escherichia coli O157:H7 str. EC1212 SSU rRNA ENA, SILVA
Escherichia coli EC4100B SSU rRNA ENA, SILVA
Escherichia coli O157:H7 str. 1044 SSU rRNA ENA, SILVA

Taxonomic tree

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