RNAcentral API

This is the RNAcentral Browsable API. When this page is opened in a browser, it is rendered as a human-friendly document, but when the same page is requested programmatically, the response is returned in a machine-readable format. See API documentation for more details.

Xref List

List of cross-references for a particular RNA sequence.

API documentation

GET /api/v1/rna/URS0000985070/xrefs?format=api

HTTP 200 OK
    Content-Type: text/html; charset=utf-8
    Vary: Accept
    Allow: GET, HEAD, OPTIONS
    
    {
    "count": 2,
    "next": null,
    "previous": null,
    "results": [
        {
            "upi": "URS0000985070",
            "database": "Rfam",
            "is_active": false,
            "first_seen": "2016-03-15 00:00:00",
            "last_seen": "2017-04-26 00:00:00",
            "taxid": 7868,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/AAVX01340532.1:26..97:rfam/info?format=api",
                "id": "AAVX01340532.1:26..97:rfam",
                "parent_ac": "AAVX01340532",
                "seq_version": 1,
                "feature_start": 26,
                "feature_end": 97,
                "feature_name": "tRNA",
                "description": "Callorhinchus milii tRNA",
                "external_id": "RF00005",
                "optional_id": "tRNA",
                "locus_tag": null,
                "species": "Callorhinchus milii",
                "inference": null,
                "rna_type": "tRNA",
                "gene": null,
                "product": "tRNA",
                "organelle": null,
                "citations": "http://rnacentral.org/api/v1/accession/AAVX01340532.1:26..97:rfam/citations?format=api",
                "expert_db_url": "http://rfam.org/family/RF00005",
                "standard_name": null,
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "RF00005",
                "ena_url": "",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS0000985070",
            "database": "Rfam",
            "is_active": false,
            "first_seen": "2016-03-15 00:00:00",
            "last_seen": "2017-04-26 00:00:00",
            "taxid": 7868,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/AAVX01164636.1:373..302:rfam/info?format=api",
                "id": "AAVX01164636.1:373..302:rfam",
                "parent_ac": "AAVX01164636",
                "seq_version": 1,
                "feature_start": 302,
                "feature_end": 373,
                "feature_name": "tRNA",
                "description": "Callorhinchus milii tRNA",
                "external_id": "RF00005",
                "optional_id": "tRNA",
                "locus_tag": null,
                "species": "Callorhinchus milii",
                "inference": null,
                "rna_type": "tRNA",
                "gene": null,
                "product": "tRNA",
                "organelle": null,
                "citations": "http://rnacentral.org/api/v1/accession/AAVX01164636.1:373..302:rfam/citations?format=api",
                "expert_db_url": "http://rfam.org/family/RF00005",
                "standard_name": null,
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "RF00005",
                "ena_url": "",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        }
    ]
}