RNAcentral API

This is the RNAcentral Browsable API. When this page is opened in a browser, it is rendered as a human-friendly document, but when the same page is requested programmatically, the response is returned in a machine-readable format. See API documentation for more details.

Xref List

List of cross-references for a particular RNA sequence.

API documentation

GET /api/v1/rna/URS00003E7957/xrefs?format=api

HTTP 200 OK
    Content-Type: text/html; charset=utf-8
    Vary: Accept
    Allow: GET, HEAD, OPTIONS
    
    {
    "count": 357,
    "next": "http://rnacentral.org/api/v1/rna/URS00003E7957/xrefs?format=api&page=2",
    "previous": null,
    "results": [
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:JAGGCG010000006.1/181948-182297/info?format=api",
                "id": "tmrna:JAGGCG010000006.1/181948-182297",
                "parent_ac": "JAGGCG010000006.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:JAGGCG010000006.1/181948-182297",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:JAGGCG010000006.1/181948-182297/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:JAGGCG010000006.1/181948-182297",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:JAGGCG010000006.1/181948-182297",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:JAGGCG010000006.1/181948-182297",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:AKXC02000018.1/332701-333050/info?format=api",
                "id": "tmrna:AKXC02000018.1/332701-333050",
                "parent_ac": "AKXC02000018.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:AKXC02000018.1/332701-333050",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:AKXC02000018.1/332701-333050/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:AKXC02000018.1/332701-333050",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:AKXC02000018.1/332701-333050",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:AKXC02000018.1/332701-333050",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:AOVW01000016.1/2008-1659/info?format=api",
                "id": "tmrna:AOVW01000016.1/2008-1659",
                "parent_ac": "AOVW01000016.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:AOVW01000016.1/2008-1659",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:AOVW01000016.1/2008-1659/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:AOVW01000016.1/2008-1659",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:AOVW01000016.1/2008-1659",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:AOVW01000016.1/2008-1659",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:AOVL01000120.1/879-530/info?format=api",
                "id": "tmrna:AOVL01000120.1/879-530",
                "parent_ac": "AOVL01000120.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:AOVL01000120.1/879-530",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:AOVL01000120.1/879-530/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:AOVL01000120.1/879-530",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:AOVL01000120.1/879-530",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:AOVL01000120.1/879-530",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:AFMJ01000021.1/802-453/info?format=api",
                "id": "tmrna:AFMJ01000021.1/802-453",
                "parent_ac": "AFMJ01000021.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:AFMJ01000021.1/802-453",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:AFMJ01000021.1/802-453/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:AFMJ01000021.1/802-453",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:AFMJ01000021.1/802-453",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:AFMJ01000021.1/802-453",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:JAGGCO010000030.1/45841-46190/info?format=api",
                "id": "tmrna:JAGGCO010000030.1/45841-46190",
                "parent_ac": "JAGGCO010000030.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:JAGGCO010000030.1/45841-46190",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:JAGGCO010000030.1/45841-46190/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:JAGGCO010000030.1/45841-46190",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:JAGGCO010000030.1/45841-46190",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:JAGGCO010000030.1/45841-46190",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:AFLC01000032.1/802-453/info?format=api",
                "id": "tmrna:AFLC01000032.1/802-453",
                "parent_ac": "AFLC01000032.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:AFLC01000032.1/802-453",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:AFLC01000032.1/802-453/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:AFLC01000032.1/802-453",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:AFLC01000032.1/802-453",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:AFLC01000032.1/802-453",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:JQOO01000040.1/46042-46391/info?format=api",
                "id": "tmrna:JQOO01000040.1/46042-46391",
                "parent_ac": "JQOO01000040.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:JQOO01000040.1/46042-46391",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:JQOO01000040.1/46042-46391/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:JQOO01000040.1/46042-46391",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:JQOO01000040.1/46042-46391",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:JQOO01000040.1/46042-46391",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:CP047512.1/172906-173255/info?format=api",
                "id": "tmrna:CP047512.1/172906-173255",
                "parent_ac": "CP047512.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:CP047512.1/172906-173255",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:CP047512.1/172906-173255/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:CP047512.1/172906-173255",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:CP047512.1/172906-173255",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:CP047512.1/172906-173255",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        },
        {
            "upi": "URS00003E7957",
            "database": "tmRNA Website",
            "is_active": true,
            "first_seen": "2024-02-22 00:00:00",
            "last_seen": "2024-02-22 00:00:00",
            "taxid": 173,
            "accession": {
                "url": "http://rnacentral.org/api/v1/accession/tmrna:AOVN01000043.1/183055-183404/info?format=api",
                "id": "tmrna:AOVN01000043.1/183055-183404",
                "parent_ac": "AOVN01000043.1",
                "seq_version": 1,
                "feature_start": 1,
                "feature_end": 351,
                "feature_name": "tmRNA",
                "description": "Leptospira interrogans Standard tmRNA",
                "external_id": "tmrna:AOVN01000043.1/183055-183404",
                "optional_id": "",
                "locus_tag": "",
                "species": null,
                "inference": "d__Bacteria,p__Spirochaetota,c__Leptospirae,o__Leptospirales,f__Leptospiraceae,Leptospira__interrogans",
                "rna_type": "tmRNA",
                "gene": "",
                "product": "",
                "organelle": "",
                "citations": "http://rnacentral.org/api/v1/accession/tmrna:AOVN01000043.1/183055-183404/citations?format=api",
                "expert_db_url": "http://bioinformatics.sandia.gov/tmrna/seqs/tmrna:AOVN01000043.1/183055-183404",
                "standard_name": "",
                "pdb_entity_id": null,
                "pdb_structured_note": null,
                "hgnc_enembl_id": null,
                "hgnc_id": null,
                "biotype": "ncRNA",
                "srpdb_id": "tmrna:AOVN01000043.1/183055-183404",
                "ena_url": "https://www.ebi.ac.uk/ena/browser/view/Non-coding:tmrna:AOVN01000043.1/183055-183404",
                "ensembl_species_url": "",
                "malacards_diseases": null
            },
            "modifications": [],
            "is_rfam_seed": false,
            "ncbi_gene_id": null,
            "ndb_external_url": null,
            "mirbase_mature_products": null,
            "mirbase_precursor": null,
            "refseq_mirna_mature_products": null,
            "refseq_mirna_precursor": null,
            "refseq_splice_variants": null,
            "ensembl_splice_variants": null,
            "gencode_transcript_id": null,
            "gencode_ensembl_url": null,
            "ensembl_url": null,
            "quickgo_hits": null
        }
    ]
}